Gene Ava_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0170 
Symbol 
ID3683250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp224512 
End bp225300 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content40% 
IMG OID637715497 
ProductPhage Gp37Gp68 
Protein accessionYP_320691 
Protein GI75906395 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00797438 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.33399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGCA CTCATACTGG TATCGAATGG ACTGATAAAA CCTGGAACCC AACTACTGGT 
TGCGACAAAG TAAGTCCGGG TTGTCGTTAT TGCTATGCTG AAGCACTTAC TGAGCGTTTT
CCTCAGAGTT TTCCTACAGG TTTTAAGCTG AACCTACATC CAGAAAGATT GGAACAACCA
AAGCGATGGC GTACTCCTAG CCGTATCTTT GTTAACTCAA TGAGCGATTT ATTTCATGAA
GATGTGCCAT TTTCATTTTT ACAAGAAATT TTTAGCATTA TGCGTGAAAC TCCTTGGCAT
ATCTATCAAA TTTTGACAAA GCGAGAGGAA AACTTAGTAG ATTTAGCGCC TAAACTCGAA
TGGACTGAAA ATATATGGAT GGGTGTATCC GTGGAAAGTC AACGATATAC CTACAGGATA
GATGCTCTAA GAAAAGTGCC AGCAGCAGTT CGATTTCTTT CATGTGAACC TTTACTGGAA
TCACTGAACT TAGATTTGCA AAATATCGAT TGGGTTATTG TTGGTGGTGA ATCTGGGTAC
AACCATCGAC CTGTAAAACC AGAATGGATT CGAGAGATTT TGCAACAAAC AAGAGAAGCA
GAAGTTGCCT TTTTTTTCAA ACAGTGGGGA GGGAAACATT CAAAAGCTGG TGGCAGAATG
CTAGATGACC ATACCTGGGA AGAGATGCCA AAGGCTTGGA GAAAGCACAT TATCAAATGG
CAGAAAAAAT TTCATGGGCA ACCAAAATTG CATGAGTTAG AGCAGAAATA TCTAATGTCC
ACTAAATAA
 
Protein sequence
MSSTHTGIEW TDKTWNPTTG CDKVSPGCRY CYAEALTERF PQSFPTGFKL NLHPERLEQP 
KRWRTPSRIF VNSMSDLFHE DVPFSFLQEI FSIMRETPWH IYQILTKREE NLVDLAPKLE
WTENIWMGVS VESQRYTYRI DALRKVPAAV RFLSCEPLLE SLNLDLQNID WVIVGGESGY
NHRPVKPEWI REILQQTREA EVAFFFKQWG GKHSKAGGRM LDDHTWEEMP KAWRKHIIKW
QKKFHGQPKL HELEQKYLMS TK