Gene Ava_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0169 
Symbol 
ID3683249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp223490 
End bp224431 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content43% 
IMG OID637715496 
Productphosphoribulokinase 
Protein accessionYP_320690 
Protein GI75906394 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0629486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.335494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCC GTCCAATAAT TCTTGGTATT GTTGGTGATA GTGCTGCTGG TAAAACTACA 
CTAACTAGGG GCATTGCTCA GGTACTGGGG CCAGAAAATG TTACACTCAT ATGCACAGAT
GATTACCATC GGTATGATCG CCAACAACGT GCAGAAATAG GAATTACAGC TCTCCACCCC
GATTGTAACC ATTTAGATAT TATGCAGCAG CATCTATCGC TGCTACGCAC AGGACAACCA
ATTCTTAAAC CAGTTTATAG TCATAAAACC GGAAGTTTTG AGCCGCCCCA ATATATAAAA
CCCAATAAAT TCGTCATTAT CGAGGGATTA CTTGGTTATT CTACTCGCGC CGCCCGTGAC
TGTTACGATG TGAAAGTTTA CCTCGCTCCT CCAGAGAACC TCCGTGCTAA ATGGAAAGTG
AAACGCGACA CGCAAAAACG CGGCTACACT CCCGAACAAG TTTTAGCAGA ATTAGAAAAG
CGCGAACCAG ATTCAGAGCA ATTTATTCGC CCCCAAAGAC AATGGTCTGA TATTGTTGTC
AGTTTCTATC CACCTCATGA GGATGGAGAT GAAACCAACG GACATCTCAA CGTGCGTTTA
GTATTGCGTC CTACCATTCC CCACCCAGAT TTTACTTCCA TTATTAATTT GACTAATGGT
AGTTCTGTGT CAGCTATTCG CCTGGGATTG GACAGAGATA TGAGTAAACC AGTTGATGTG
TTAGAAGTTG ATGGTCACGC TACCTTAGAA CAGGTAAATA AATTAGAGCA TATTCTCTGT
TCTGATATGC CTTACTTAAG TAGTGTATGC GATCGCGAAA GTAACCCAGA ATTGGGCAAG
ATTGCGGGGA CAACTGGCGA AACACTACAA AGTTACCCCC TCGCCCTGAC TCAGTTAATC
ATCACCTACC ATATGCTCAA GGCAACGCAA ATTTATCAGT AA
 
Protein sequence
MMSRPIILGI VGDSAAGKTT LTRGIAQVLG PENVTLICTD DYHRYDRQQR AEIGITALHP 
DCNHLDIMQQ HLSLLRTGQP ILKPVYSHKT GSFEPPQYIK PNKFVIIEGL LGYSTRAARD
CYDVKVYLAP PENLRAKWKV KRDTQKRGYT PEQVLAELEK REPDSEQFIR PQRQWSDIVV
SFYPPHEDGD ETNGHLNVRL VLRPTIPHPD FTSIINLTNG SSVSAIRLGL DRDMSKPVDV
LEVDGHATLE QVNKLEHILC SDMPYLSSVC DRESNPELGK IAGTTGETLQ SYPLALTQLI
ITYHMLKATQ IYQ