Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0168 |
Symbol | |
ID | 3683248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 221317 |
End bp | 222933 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637715495 |
Product | hypothetical protein |
Protein accession | YP_320689 |
Protein GI | 75906393 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0755922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.554039 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGGCAG GGACTATGGT AACGCTAAAT CATACAGAAT TAGAATCAGT TGATCAGTTT CGTAGTCTGC AATGTACTTT ACGCGATCGC TGGAAAACTA TCGAGCAATT TGATACTGGT GAAGCGGATA TTGTCGTTAT TCCTTCCTTA AGTATTGACC AACGCGAAAT TCAAAAAGTT GAAGGTTGCG AACATTATGA AGAAAGATTA CTTTTTGCTT TGATGCGGTT ACGAAATCCC CGTACAAGAT TGATTTATGT AACATCAATT CCATTGCATC CCAGCATTAT TGATTATTAT TTGCAACTAC TGCCGGGTAT CCCATTTTCT CATGCGCGTA ATCGCTTGCT ACTGCTTTCG ACTTATGATT CTTCTCCTCA ACCTCTAAGT CGAAAAATCT TAGAACGTCC CCGCTTAATG GAAAGAATTC GGCAAGCCTT GAGGTTAGAA AAATCATTTA TAATTTGCTA CAACTCGACA GATTTAGAAG CAGAATTATC ACTTAAATTA AATGTACCAT TGTATGCTGC TGCACCAGAT TTGCAGATTT GGGGGACAAA AAGCGGTAGT CGGCAAATCT TTACAGAAAG CGGTGTACCT CATCCTGATG GGAGTGAACT GGTTTGGCGC TATCAAGATT TAGCAGTAGC AGCAAGTGAT TTGTGGGAAC GCCAACCTTC ATTAAAACGG ATGGTAGTCA AATTAAATGA AGGGATTTCT GGAGAAGGAA ACGCCCTGCT AGACTTGCAA CCAATTATGA ATATTGCGCC AGGACAAGCA TCGACAGCAG AAAGGGTAGC AGCAATTAGC GATCGCTTTT CTTCTCTGCG TTTTCAAGCC AAGCAAGAAA ATTGGCAGAA CTTTTCAGGA CGAATTACCG AATTAGGGGC GATTGTCGAA GCATTTGTGG AAGGAGAAAA TAAGCGATCG CCTAGTGTCC AAGGACGGAT CACCCCCACA GGTGAAGTAG AAATTCTCTC GACTCACGAC CAAATTCTTG GCGGCCCAGA TGGTCAAATT TATTTGGGTT GTCGCTTCCC GGCTGATGAG CGCTATCGCT TGCAATTACA ACAATTAGGG TTACAAGTCG GTAGAAAGCT GGCTCAAAAA GGAGCTTTAG AAAGATTTGG GGTAGATTTT ATCACCGTTG ACCAAGGTAA CGGTCAATGG GATATTCAAG CAATTGAAAT TAACCTCCGC AAAGGTGGGA CAACCCATCC TTTCATGACC TTAAAATTAT TGACTAACGG TCGTTATGAA CTATCAACTG GTTTATTCTA TAGTCAGCAA GGTCGCCCCA AGTATTACAT TGCTACAGAC AACCTGCAAA AAGACCGCTA TCGTGGATTG CTACCCAACG ATTTAATGGA TATCATCGCC CATCATAGAT TGCACTTTGA TAGCTGTACG GAAACCGGGA CGGTGTTTCA TCTGATGGGT TGTCTTTCTC AGTTTGGCAA ATTGGGGCTA ACTAGCATTG GTGATTCTCC CCAACAAGCC GAAGATATAT ATAACAAAGT CGTCAAAGTT TTGGACGAAG AAACCCGCGT TAATAATAAA CAGTTTCCCC TGTTTTCTGA TTACACCTTC CCCAATTCCT GGGATGGATA TAGTTAA
|
Protein sequence | MGAGTMVTLN HTELESVDQF RSLQCTLRDR WKTIEQFDTG EADIVVIPSL SIDQREIQKV EGCEHYEERL LFALMRLRNP RTRLIYVTSI PLHPSIIDYY LQLLPGIPFS HARNRLLLLS TYDSSPQPLS RKILERPRLM ERIRQALRLE KSFIICYNST DLEAELSLKL NVPLYAAAPD LQIWGTKSGS RQIFTESGVP HPDGSELVWR YQDLAVAASD LWERQPSLKR MVVKLNEGIS GEGNALLDLQ PIMNIAPGQA STAERVAAIS DRFSSLRFQA KQENWQNFSG RITELGAIVE AFVEGENKRS PSVQGRITPT GEVEILSTHD QILGGPDGQI YLGCRFPADE RYRLQLQQLG LQVGRKLAQK GALERFGVDF ITVDQGNGQW DIQAIEINLR KGGTTHPFMT LKLLTNGRYE LSTGLFYSQQ GRPKYYIATD NLQKDRYRGL LPNDLMDIIA HHRLHFDSCT ETGTVFHLMG CLSQFGKLGL TSIGDSPQQA EDIYNKVVKV LDEETRVNNK QFPLFSDYTF PNSWDGYS
|
| |