Gene Ava_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0168 
Symbol 
ID3683248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp221317 
End bp222933 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content42% 
IMG OID637715495 
Producthypothetical protein 
Protein accessionYP_320689 
Protein GI75906393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0755922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.554039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCAG GGACTATGGT AACGCTAAAT CATACAGAAT TAGAATCAGT TGATCAGTTT 
CGTAGTCTGC AATGTACTTT ACGCGATCGC TGGAAAACTA TCGAGCAATT TGATACTGGT
GAAGCGGATA TTGTCGTTAT TCCTTCCTTA AGTATTGACC AACGCGAAAT TCAAAAAGTT
GAAGGTTGCG AACATTATGA AGAAAGATTA CTTTTTGCTT TGATGCGGTT ACGAAATCCC
CGTACAAGAT TGATTTATGT AACATCAATT CCATTGCATC CCAGCATTAT TGATTATTAT
TTGCAACTAC TGCCGGGTAT CCCATTTTCT CATGCGCGTA ATCGCTTGCT ACTGCTTTCG
ACTTATGATT CTTCTCCTCA ACCTCTAAGT CGAAAAATCT TAGAACGTCC CCGCTTAATG
GAAAGAATTC GGCAAGCCTT GAGGTTAGAA AAATCATTTA TAATTTGCTA CAACTCGACA
GATTTAGAAG CAGAATTATC ACTTAAATTA AATGTACCAT TGTATGCTGC TGCACCAGAT
TTGCAGATTT GGGGGACAAA AAGCGGTAGT CGGCAAATCT TTACAGAAAG CGGTGTACCT
CATCCTGATG GGAGTGAACT GGTTTGGCGC TATCAAGATT TAGCAGTAGC AGCAAGTGAT
TTGTGGGAAC GCCAACCTTC ATTAAAACGG ATGGTAGTCA AATTAAATGA AGGGATTTCT
GGAGAAGGAA ACGCCCTGCT AGACTTGCAA CCAATTATGA ATATTGCGCC AGGACAAGCA
TCGACAGCAG AAAGGGTAGC AGCAATTAGC GATCGCTTTT CTTCTCTGCG TTTTCAAGCC
AAGCAAGAAA ATTGGCAGAA CTTTTCAGGA CGAATTACCG AATTAGGGGC GATTGTCGAA
GCATTTGTGG AAGGAGAAAA TAAGCGATCG CCTAGTGTCC AAGGACGGAT CACCCCCACA
GGTGAAGTAG AAATTCTCTC GACTCACGAC CAAATTCTTG GCGGCCCAGA TGGTCAAATT
TATTTGGGTT GTCGCTTCCC GGCTGATGAG CGCTATCGCT TGCAATTACA ACAATTAGGG
TTACAAGTCG GTAGAAAGCT GGCTCAAAAA GGAGCTTTAG AAAGATTTGG GGTAGATTTT
ATCACCGTTG ACCAAGGTAA CGGTCAATGG GATATTCAAG CAATTGAAAT TAACCTCCGC
AAAGGTGGGA CAACCCATCC TTTCATGACC TTAAAATTAT TGACTAACGG TCGTTATGAA
CTATCAACTG GTTTATTCTA TAGTCAGCAA GGTCGCCCCA AGTATTACAT TGCTACAGAC
AACCTGCAAA AAGACCGCTA TCGTGGATTG CTACCCAACG ATTTAATGGA TATCATCGCC
CATCATAGAT TGCACTTTGA TAGCTGTACG GAAACCGGGA CGGTGTTTCA TCTGATGGGT
TGTCTTTCTC AGTTTGGCAA ATTGGGGCTA ACTAGCATTG GTGATTCTCC CCAACAAGCC
GAAGATATAT ATAACAAAGT CGTCAAAGTT TTGGACGAAG AAACCCGCGT TAATAATAAA
CAGTTTCCCC TGTTTTCTGA TTACACCTTC CCCAATTCCT GGGATGGATA TAGTTAA
 
Protein sequence
MGAGTMVTLN HTELESVDQF RSLQCTLRDR WKTIEQFDTG EADIVVIPSL SIDQREIQKV 
EGCEHYEERL LFALMRLRNP RTRLIYVTSI PLHPSIIDYY LQLLPGIPFS HARNRLLLLS
TYDSSPQPLS RKILERPRLM ERIRQALRLE KSFIICYNST DLEAELSLKL NVPLYAAAPD
LQIWGTKSGS RQIFTESGVP HPDGSELVWR YQDLAVAASD LWERQPSLKR MVVKLNEGIS
GEGNALLDLQ PIMNIAPGQA STAERVAAIS DRFSSLRFQA KQENWQNFSG RITELGAIVE
AFVEGENKRS PSVQGRITPT GEVEILSTHD QILGGPDGQI YLGCRFPADE RYRLQLQQLG
LQVGRKLAQK GALERFGVDF ITVDQGNGQW DIQAIEINLR KGGTTHPFMT LKLLTNGRYE
LSTGLFYSQQ GRPKYYIATD NLQKDRYRGL LPNDLMDIIA HHRLHFDSCT ETGTVFHLMG
CLSQFGKLGL TSIGDSPQQA EDIYNKVVKV LDEETRVNNK QFPLFSDYTF PNSWDGYS