Gene Ava_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0166 
Symbol 
ID3683246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp219502 
End bp220335 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content44% 
IMG OID637715493 
Productnaphthoate synthase 
Protein accessionYP_320687 
Protein GI75906391 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0447] Dihydroxynaphthoic acid synthase 
TIGRFAM ID[TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCG ACTGGCAATC TACCAAAACC TACGAAGATA TCCTTTATCA CAAAGCTGAT 
GGTATGGCTA AAATTACCAT CAACCGTCCG CACAAACGCA ATGCTTTTCG CCCCAAAACT
GTTTTTGAAC TGTATGACGC GTTCTGTGAT GCTCGTGAAG ATACTAATAT TGGCGTAGTT
CTATTTACTG GTGCTGGTCC CCATACTGAT GGCAAATATG CCTTCTGTTC TGGTGGAGAC
CAAAGCGTGC GAGGGCAAGC TGGCTATGTG GATGATGCTG GCATTCCTCG CTTAAATGTG
CTGGATTTAC AACGCCTGAT TCGTTCCATG CCAAAGGTGG TAATTGCTTT GGTTGCTGGA
TATGCGATCG GTGGTGGACA CGTCCTACAC TTGATTTGTG ACCTTACCAT TGCTGCTGAT
AATGCTATTT TTGGTCAGAC TGGCCCGAAA GTGGGCAGTT TTGATGGTGG TTTTGGCGCT
AGCTATCTTG CGCGCATTGT TGGACAGAAA AAAGCACGAG AAATTTGGTT TCTCTGTCGT
CAATATGATG CCCAACAAGC TTTAGAAATG GGTTTAGTAA ATTGCGTTGT GCCGATAGAG
CAACTAGAAG CAGAAGGAAT TAAATGGGCT GGAGAAATTC TAGAAAAAAG CCCTATTGCC
ATTCGCTGTC TCAAAGCAGC ATTTAATGCT GATTGTGATG GACAAGCTGG TTTACAAGAA
CTAGCTGGTA ATGCCACCTT ACTTTATTAC ATGACAGAAG AAGGTGCTGA AGGTAAACAA
GCTTTTTTAG AAAAACGTCC ACCAAATTTT CGAGATTTTC CTTGGCTACC GTGA
 
Protein sequence
MQIDWQSTKT YEDILYHKAD GMAKITINRP HKRNAFRPKT VFELYDAFCD AREDTNIGVV 
LFTGAGPHTD GKYAFCSGGD QSVRGQAGYV DDAGIPRLNV LDLQRLIRSM PKVVIALVAG
YAIGGGHVLH LICDLTIAAD NAIFGQTGPK VGSFDGGFGA SYLARIVGQK KAREIWFLCR
QYDAQQALEM GLVNCVVPIE QLEAEGIKWA GEILEKSPIA IRCLKAAFNA DCDGQAGLQE
LAGNATLLYY MTEEGAEGKQ AFLEKRPPNF RDFPWLP