Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0142 |
Symbol | rpmB |
ID | 3683281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 188991 |
End bp | 189227 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715469 |
Product | 50S ribosomal protein L28 |
Protein accession | YP_320663 |
Protein GI | 75906367 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0227] Ribosomal protein L28 |
TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0995678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTC GATGTGATCT TACTGGTAAA AAGGCAAATA ACGCTTTTGC TGTTTCCCAC TCCCACCGTC GTACCAAACG CTTACAACAA GCAAATCTGC AAAGCAAGCG CGTTTGGTGG CCAAGCGGCA ACCGTTGGGT CAAACTAAAG CTATCTACCA AAGCCATTAA AACCTTAGAA GTCAAAGGTT TAGAAGCAAT GGCAAAAGAA GCTGGGATTA ACCTCAACCA TTACTAA
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Protein sequence | MSRRCDLTGK KANNAFAVSH SHRRTKRLQQ ANLQSKRVWW PSGNRWVKLK LSTKAIKTLE VKGLEAMAKE AGINLNHY
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