Gene Ava_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0139 
Symbol 
ID3683278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp182755 
End bp183192 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID637715466 
Productglyoxalase I 
Protein accessionYP_320660 
Protein GI75906364 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR00068] lactoylglutathione lyase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00128753 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAC TACATACAAT GCTACGGGTG GGTAACCTGG AAGAGTCCTT GAAATTCTAC 
TGTGATGTCC TGGGCATGAA GTTACTACGG AGAAAGGATT ACCCAGGAGG AGAATTTACC
CTAGCTTTTA TTGGCTACGG TGATGAGAGC GATAACACAG TTATAGAACT AACCTACAAT
TGGGGAGTTG ATAAGTACGA ATTAGGTAAT GCTTACGGTC ATATTGCCCT TGGTGTAGAT
GATATTTATG CCACCTGTGA GTCTATTAAA AATCAGGGCG GTAAGGTGGT TAGGGAACCA
GGGCCGATGA AGCATGGCTC GACTGTGATT GCTTTTGTCG AAGACCCAGA TGGATACAAG
ATCGAACTAA TCCAGTTGAG TAATCAAAGC GAGACAGTCA AACAGGATTC ATCAGAACAG
CTAGTGAAAC AGGGTTAG
 
Protein sequence
MRLLHTMLRV GNLEESLKFY CDVLGMKLLR RKDYPGGEFT LAFIGYGDES DNTVIELTYN 
WGVDKYELGN AYGHIALGVD DIYATCESIK NQGGKVVREP GPMKHGSTVI AFVEDPDGYK
IELIQLSNQS ETVKQDSSEQ LVKQG