Gene Ava_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0128 
Symbol 
ID3683345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp171705 
End bp172016 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content49% 
IMG OID637715455 
ProductRNA-binding region RNP-1 
Protein accessionYP_320649 
Protein GI75906353 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTT ATGTAGGGAA CCTCTCTTAC GAAGTTACGC AAGAGGATAT CAGCAACGTT 
TTTGCAGAAT ATGGTTCTGT AAAACGGGTT GTGCTACCTA CTGACCGCGA AACAGGTCGC
CTGCGTGGTT TTGCTTTTGT GGAAATGGGT TCAGATGCAG AAGAAACAGC CGCCATCGAG
GGTCTTGATG GTGCTGAGTG GATGGGTCGT GACCTGAAAG TTAATAAAGC CAAGCCCAAA
GAAGACAGAG GCTCCTTTGG TGGTGGAAAC CGGGGAGGAT ACGGCGGTGG CGGTGGTCGT
TCCCGTTATT AA
 
Protein sequence
MSIYVGNLSY EVTQEDISNV FAEYGSVKRV VLPTDRETGR LRGFAFVEMG SDAEETAAIE 
GLDGAEWMGR DLKVNKAKPK EDRGSFGGGN RGGYGGGGGR SRY