| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0123 |
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| Symbol | |
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| ID | 3683340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 163484 |
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| End bp | 165319 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637715450 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_320644 |
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| Protein GI | 75906348 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATA AACAGTTAGA CCCATATAAA AAGGATATTT TGATTATTGA TGACATGGCA
GACAATCTGC GCGTCTTGTC ATCAATTCTT GCTAGGGAAG GATATAACGT TCGTAAAGCC
TTAAACTGGC AAATGGCTTG TACAGCTTGT CAAACATTAT TACCTGATTT GATTTTGCTT
GATATTATGA TGCCAGAGGT AGATGGTTAT GAAGTTTGTC AAAGATTTAA AGCTTGGGAA
CTGACATCTG ATATTCCAGT AATTTTTATT AGTGCTTTAG ATGATGTTTT TGACAAAGTT
AAGGCTTTCA AAGTTGGTGG GGTAGATTAT ATTACTAAAC CTTTTGAATT AGAAGAAGTC
TTAGTACGTG TAAAAAATCA AATAGAATTG CGAACGGCAA GAATAGAAAT CTTAACGCTG
AATGCTGAAT TAGAACAAAG AGTGAAGCAG CGTACTTGGG AGTTAGAAAA GGCTTTGCAA
AAACTCCAAA TAGAAGTTAG TGCGCGTCAA AAGTTACAAG GCAAATTGCT GGATATGGCG
CTCCATGACG CTCTTACTGG TTTACCAAAC AGAATTTTGT TTATCAGGAG ATTAGGAAAA
GCTTTAAATC GCGCTAAAGA AGAATCTAAT TATCAATTTG CAGTACTATT TTTAGACTGC
GATCGCTTCA AAGTTGTCAA TGATTCTTTA GGGCATTTAG TAGGGGATGA ATTACTTATT
TCTATCGCTA ATAGACTCCA ATCTTGTCTC ACAACAGACT CTACTCTAGC AAGACTAGGT
GGTGATGAAT TTGGCATTTT GTTAGAGGAT ATAAAAGATA TCCGCATGGC AATTCAAATA
GCCGATTACA TTCTGCAACA ACTATCTATG TCTTTTAAAC TGTCTAGATA CGAAGTTTTT
ATGAATGTCA GCATTGGCAT TAATTGGGGT CATCAAGGAT ATGATCAACC AGAATATTTG
CTACGAGATG CTGATACAGC CATGTATCGT GCTAAAGATT CAGGAAGGGC TAGATATCAT
GTTTTTGACC CAGCAATGCA CGAGGAAGTG ATCAAAGCCT TAGAAAAGGA AAATGACTTA
CGTAGGTCAG TGGAAAAACA AGAGTTTGTT ATTTATTACC AGCCAATTAT TTCTCTGACT
ACAGGCAAAA TCTCTGGATT TGAAGCACTT GTTCGTTGGC AGCATCCAAC TCACGGTTTG
ATTGCTCCGA CAGAATTTAT TCCAGTAGCC GAAGAAACTG GTCTAATTAA TATTATCAAT
ATGTGGGTGT TGCAGTCAGC TTGTCAGCAA CTACGCATCT GGCAATCTCA TCCAATGACC
CCTAAAAATC TCAGTATTAG TGTTAATTTA AGCGCGAAAT TATTTTTGCA GACTAATTTC
ATAACACAAG TAGATCAAAT TATCAAAGAT ACTCAAATAG ATCCATCTAA TTTAGAGCTA
GAAATCACAG AAACCGTGAT TATGGAAAAT AATAATGAAA TTAAAGTAAT TCTCCAACAA
TTAAAGGAGC GTAAAATTAA ACTGATAATG GATGACTTCG GCACAGGTTA TTCGTCCCTG
AGCTATTTAC ATATATTTCC TTTTAATGCC CTAAAAATCG ATAAATCATT TGTTAATCGG
ATGTTGGATA ATCAGGAAAA TATGGGATTA GTACCTGCGA TGATTAGCAT TGCTGCATCT
ATGGGTATGT CGGCGATCGC AGAAGGAGTT GAAACCCAAG AACAATTGGA ACAACTGAAG
AGTTTAAAAT GTGATTTTGC ACAAGGATAT CTATTTTCTC GACCCATAGC TCAGAACATG
GTAATGGATT TTATCGCCTC AGCAACCAAA TGGTAA
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| Protein sequence | MNYKQLDPYK KDILIIDDMA DNLRVLSSIL AREGYNVRKA LNWQMACTAC QTLLPDLILL
DIMMPEVDGY EVCQRFKAWE LTSDIPVIFI SALDDVFDKV KAFKVGGVDY ITKPFELEEV
LVRVKNQIEL RTARIEILTL NAELEQRVKQ RTWELEKALQ KLQIEVSARQ KLQGKLLDMA
LHDALTGLPN RILFIRRLGK ALNRAKEESN YQFAVLFLDC DRFKVVNDSL GHLVGDELLI
SIANRLQSCL TTDSTLARLG GDEFGILLED IKDIRMAIQI ADYILQQLSM SFKLSRYEVF
MNVSIGINWG HQGYDQPEYL LRDADTAMYR AKDSGRARYH VFDPAMHEEV IKALEKENDL
RRSVEKQEFV IYYQPIISLT TGKISGFEAL VRWQHPTHGL IAPTEFIPVA EETGLINIIN
MWVLQSACQQ LRIWQSHPMT PKNLSISVNL SAKLFLQTNF ITQVDQIIKD TQIDPSNLEL
EITETVIMEN NNEIKVILQQ LKERKIKLIM DDFGTGYSSL SYLHIFPFNA LKIDKSFVNR
MLDNQENMGL VPAMISIAAS MGMSAIAEGV ETQEQLEQLK SLKCDFAQGY LFSRPIAQNM
VMDFIASATK W
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