| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0098 |
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| Symbol | lpxB |
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| ID | 3683373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 131492 |
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| End bp | 132646 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637715425 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_320619 |
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| Protein GI | 75906323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.540012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.212271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATAT TTATTAGCAC TGGCGAAGTT TCTGGCGATT TGCAAGGGGC GCTGTTGATT
GCTGCCTTGA AGCGTCAGGC TGTGGCTATG GGGATGGAGT TAGAGATTGT AGCCTTAGGT
GGCGACAAAA TGGCGGCGGC TGGGGCAACT ATTTTGGGCA ATACCAGTGG TATTGGTTCA
ATGGGGATTT TTGAGTCTCT GCCCTATGTT TTGCCTACTT TGATAGTACA GCGACGAGCG
ATCGCCTATT TAAAACAAAA TCCCCCAGAC TTAGTAGTCC TGATTGATTA CATGGGGCCT
AATCTCGGTG TCGGCACTTA TATGCAGAAC CATTTACCTA ATGTGCCTGT GGTGTATTAT
ATAGCACCAC AAGAGTGGGT TTGGTCGATG AGTTTGCGGA ATACATCCCG AATTGTTGGT
TTTACAGATA AGTTATTAGC TATTTTCCCG GAAGAAGCTC GTTATTTTAG TAACAACGGT
GCAAATGTTA CCTGGGTGGG ACATCCTTTA CTTGATAGGA TGCAGGATGT TCCTAGCAGA
GAAGAGGCTC GCGCTAATTT AGGCATTACA CCAGAACAAA AAGCGATCGC TCTTTTGCCA
GCTTCCCGTC GGCAAGAGTT AAAATATCTA CTACCGATAA TTTTCCAATC TGCCCAAACT
ATTCAAGCTA AATTACCAGA AGCTCATTTT TGGATTCCCC TGTCGTTGGA AGTATACAGA
CAACCAATTG AAGCAGCCAT CAAGGCTTAT GGTTTACAGG CTACAGTAGT ATCAGGTCAA
CAAAAAGAAG TATTTGCGGC GGCTGATATC GCCATTACCA AATCTGGTAC GGTTAATTTA
GAACTGGCAT TGTTAAACGT GCCGCAAGTT GTAGTTTACC GCTTGCATCC CGTCACTGTG
TGGATTGCGC GGAAAATCCT CAAAGGTTCC ATTCCCTTCG CTTCCCCACC TAATTTAGTG
GTGATGAAAC CAATTGTCCC GGAGTTGTTA CAAGAACAAG CAACCCCAGA GAATATCACT
CAAGCAGCGA TGGAATTATT GCTCAATTGC GAGCGTCGTC AGCAAACCTT GGCAGACTAT
CACGAAATGC GCCAATGTTT GGGAGAATTA GGAGTATGCG ATCGCGCAGC TCAAGAAATT
TTGCAGATGC TTTAG
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| Protein sequence | MRIFISTGEV SGDLQGALLI AALKRQAVAM GMELEIVALG GDKMAAAGAT ILGNTSGIGS
MGIFESLPYV LPTLIVQRRA IAYLKQNPPD LVVLIDYMGP NLGVGTYMQN HLPNVPVVYY
IAPQEWVWSM SLRNTSRIVG FTDKLLAIFP EEARYFSNNG ANVTWVGHPL LDRMQDVPSR
EEARANLGIT PEQKAIALLP ASRRQELKYL LPIIFQSAQT IQAKLPEAHF WIPLSLEVYR
QPIEAAIKAY GLQATVVSGQ QKEVFAAADI AITKSGTVNL ELALLNVPQV VVYRLHPVTV
WIARKILKGS IPFASPPNLV VMKPIVPELL QEQATPENIT QAAMELLLNC ERRQQTLADY
HEMRQCLGEL GVCDRAAQEI LQML
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