| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0095 |
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| Symbol | lpxC |
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| ID | 3683370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 128861 |
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| End bp | 129703 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637715422 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_320616 |
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| Protein GI | 75906320 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.23635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.121635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAGC ACACTCTAGC AGAGGCGATC GCTCACACTG GAGTAGGGCT GCATAGTGGT
GTCAGTACCC ATGTACGCAT ACTACCTGCT GATGCGGGTA GTGGTCGTTA CTTCGTGCGG
GTGGATTTGC CAGACTCCCC AATCATTCCC GCCCAAGTGG CGGCGGTGAG TCAAACCGTC
CTCTCCACTC AGTTGGGGAA AGGTGAAGCA GGTGTCCGTA CAGTCGAGCA TTTATTAGCA
GCCCTGGCGG GGATGGGTGT AGATAACGCC CGTATTGAAA TTGATGGTTC AGAAGTCCCG
CTTTTAGATG GTTCAGCCCA GGAATGGGTA AAAAGCATTG CTGAAGTTGG CTTAGTAACC
CAAGCAGTTA CAGATAACAC AGTTTCCTGG GATATTCCAG AACCAATTTG GATTCATCAA
GACGATGCTT TTGTAGCTGC TATCCCGGCA TCCGAAACCC GCTTTAGCTA TGGCATTGAC
TTTGACTTAC CAGCCATTGG TAATCAATGG TACAGTTGGC CACTAACTAC TGAGTCAGAT
ACTAGCTTTG CCAAGGAAGT CGCCCCTGCT CGCACTTTTG GTTTACTGCA TCAAATCGAA
TATTTACAAA AATCTGGGTT AATCAAAGGT GGTAGTTTGG ATAATGCCCT TGTTTGCGGC
CCCGATGGCT GGGTAAATCC ACCATTAAGA TTTGCAAATG AGCCAGTACG TCATAAAATC
TTGGATCTAG TAGGAGATTT AAGTTTACTG GGATATTTTC CCCGCGCTCA TTTCCTAGCG
TATAAAGCCA GCCATAATTT ACACATTCAA CTGGCACAGC GAATTTTAGC CTTGAGTAAC
TAA
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| Protein sequence | MKQHTLAEAI AHTGVGLHSG VSTHVRILPA DAGSGRYFVR VDLPDSPIIP AQVAAVSQTV
LSTQLGKGEA GVRTVEHLLA ALAGMGVDNA RIEIDGSEVP LLDGSAQEWV KSIAEVGLVT
QAVTDNTVSW DIPEPIWIHQ DDAFVAAIPA SETRFSYGID FDLPAIGNQW YSWPLTTESD
TSFAKEVAPA RTFGLLHQIE YLQKSGLIKG GSLDNALVCG PDGWVNPPLR FANEPVRHKI
LDLVGDLSLL GYFPRAHFLA YKASHNLHIQ LAQRILALSN
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