| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0088 |
|---|
| Symbol | |
|---|
| ID | 3683441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 116511 |
|---|
| End bp | 117380 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637715415 |
|---|
| Product | heat shock protein HtpX |
|---|
| Protein accession | YP_320609 |
|---|
| Protein GI | 75906313 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.565985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.068582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAATC AATTTAAAAC GCTTGCTTTG CTTGCTGCCC TCAGTGGCTT ACTAATTGCT
ATCAGTTATT GGGTAATTGG CGGTAGTAGC GGCTTGATTA TTGGCATTGG CTTGGCGGCA
GTGACAAACC TGCTGTCATG GTATCAATCA GATAAGATTG CCTTGGCAGT TTACCGCGCC
CAACCTGTGA GTGAAAGTCA AGCGCCAAGA CTTTATCGTA TGGTGCAAAG ATTATCACAA
CGTGCTAATA TTCCCATGCC AGGAGTGTAT ATTGTTCCAG GTCAAACTGC TAATGCTTTT
GCGACAGGAA GAGATCCAGA ACACGCGGCG GTGGCTGTCA CCGAAGGTAT TTTAAATATA
TTGCCAGAAG ATGAATTAGA AGCGGTCATT GCCCACGAAC TTACACATAT TATTAACCGC
GACACGTTAA CACAAGCTGT AGCCGCTACT GTTGCCGGTG CTATCTCTTT CTTGGCGCAA
ATGGTGAGTT ATAGCTTATG GTTCGGCGGA ATAGGTGGAC GAGATAACGA AAGAGGCGGA
AATCCTTTAG GTGTTTTGTT AACTGTTGTG CTTGCACCTA TAGCAGCTAC TATCATTCAG
CTAGCTATAT CCCGCACTAG AGAATTTTCT GCTGATGCTG GTTCTGCCAG ATTAACAGGT
AATCCCCGCG CCCTAGCCCG CGCATTACAA AGACTAGAAG CCGCAGCGCG ACAAATACCT
TTAAATGCTA ACCCAGCTTT TGAGCCGCTA TTAATTATCA ACTCCATTTC TGGGCAGTTT
TTAGGTAACT TATTTTCCAG CCATCCATCC ACCGAAGCAA GAGTTCAAGC ACTGCTGAAG
TTAGAAAAAC AACTGCCGAC AATAGCTTAG
|
|---|
| Protein sequence | MGNQFKTLAL LAALSGLLIA ISYWVIGGSS GLIIGIGLAA VTNLLSWYQS DKIALAVYRA
QPVSESQAPR LYRMVQRLSQ RANIPMPGVY IVPGQTANAF ATGRDPEHAA VAVTEGILNI
LPEDELEAVI AHELTHIINR DTLTQAVAAT VAGAISFLAQ MVSYSLWFGG IGGRDNERGG
NPLGVLLTVV LAPIAATIIQ LAISRTREFS ADAGSARLTG NPRALARALQ RLEAAARQIP
LNANPAFEPL LIINSISGQF LGNLFSSHPS TEARVQALLK LEKQLPTIA
|
|---|
| |