Gene Ava_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0076 
Symbol 
ID3683429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp98606 
End bp99862 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content42% 
IMG OID637715403 
ProductATPase associated with various cellular activities 
Protein accessionYP_320597 
Protein GI75906301 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID[TIGR02640] gas vesicle protein GvpN 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0615822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000700861 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTCTGA CTGCAAATAA TAAGAAAAGA GCTGTTCTCC GCGTCCGTCC CGGTCAATTT 
GTTGTTACAC CTGCCATTGA GCAGGTAGCA ATTCGGGCGT TACGTTATCT GACATCAGGA
TTTGCTATTC ACTTACGGGG TCCAGCCGGT ACAGGAAAAA CAACTTTAGC CATGCACTTG
GCTAACTGTT TGGATAGACC AATCATGTTG ATTTTCGGAG ATGATGAATT TAAAAGTTCT
GATTTGATTG GTAGTGAATC CGGTTATACC CATAAAAAGT TACTGGACAA TTACATTCAC
AGTGTTCTCA AAGTCGAAGA CGAATTTAAA CAAAATTGGG TCGATTCTAG ACTAACTCTA
GCTTGTAGAG AAGGCTTCAC CTTGGTCTAC GACGAATTTA ACCGTTCTAG ACCGGAAGTG
AATAACGTCT TACTATCAGC TTTGGAAGAA AAAATTCTGA CTCTTCCTCC TAGTAGTAAT
CAGCCAGAAT ACTTGCACGT TAATCCCCAA TTTCGGGCTA TTTTTACCTC TAATCCAGAA
GAGTACTGCG GAGTCCACTC GACGCAGGAT GCTTTAATGG ATCGGTTGGT AACTATTAAT
ATGCCAGAGC CGGATGAGCT AACTCAAACT GAGATATTAG CTCAGAAAAC CGCACTCAAT
AGAGCAGATG CGCTGTTAGT CGTGCAATTG GTGAAAGCAT TTCGCTCACG TACAGGTGGG
GAAAAGACTT CTGGCTTGCG GTCTTGTTTG ATGATTGCTA AGGTATGTGC CGAACACAAT
ATTTTAGTTG CACCAGAAAG CTCTGATTTT CGAGAAATCT GTGCAGATGT GCTGTTCAAC
CGCACGAATT GGTCTGCTAG CGAAGCTACA ACGATTTTCC TTGAATTACT GAATCATCTG
AACTTAGAGG AAATAGAGGA ATTCAAGAAT AGTATTACAT CAGAGGATAC GGATGCGATC
GCAGACGAAG ATCACAATGC GATCAACGAA AGCGGGTTTC CTACCATCAT CGATTCTCAG
TTTGGTACTC TTGATTCTGA AGTTCTCGAA CAACCAGGTG TGGAAGATTC TATTCCATTT
GAGCGGGAAA TTTATCTCTA CTTACAACAG TACAAGAGTG CAGCTTTAGC TCTACTTCAA
CAAGAATTTG AACTCAGTCG GACTGTAGCT ACCAACGCTC TCAACTCTTT AGAGCAGAAA
GGCTTAGTCA GCAAGAACAA TCATGTATAT ACCATTGAAG AGCCGAATCA ACCGTGA
 
Protein sequence
MTLTANNKKR AVLRVRPGQF VVTPAIEQVA IRALRYLTSG FAIHLRGPAG TGKTTLAMHL 
ANCLDRPIML IFGDDEFKSS DLIGSESGYT HKKLLDNYIH SVLKVEDEFK QNWVDSRLTL
ACREGFTLVY DEFNRSRPEV NNVLLSALEE KILTLPPSSN QPEYLHVNPQ FRAIFTSNPE
EYCGVHSTQD ALMDRLVTIN MPEPDELTQT EILAQKTALN RADALLVVQL VKAFRSRTGG
EKTSGLRSCL MIAKVCAEHN ILVAPESSDF REICADVLFN RTNWSASEAT TIFLELLNHL
NLEEIEEFKN SITSEDTDAI ADEDHNAINE SGFPTIIDSQ FGTLDSEVLE QPGVEDSIPF
EREIYLYLQQ YKSAALALLQ QEFELSRTVA TNALNSLEQK GLVSKNNHVY TIEEPNQP