Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0073 |
Symbol | |
ID | 3683485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 96706 |
End bp | 97440 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637715400 |
Product | gas vesicle synthesis GvpLGvpF |
Protein accession | YP_320594 |
Protein GI | 75906298 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.177784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00184802 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTCTG GTCTTTATCT ATACGGCATT TTTCCCGATC CAATCCCAGA AACAGTTGCT CTTCAAGGAT TGGATTCTCA ACTTGTCTAT AGTCAAGTTA TTGATGGATT TACGTTTTTA TATTCAGAAG CACAACAAGA AAAATATCTA GCATCTCGGC GAAATTTAAT CAGCCATGAA AAGGTATTAG AACAAGCGAT GCACGCTGGA TTTAGAACTT TGCTACCCTT GCGTTTTGGA CTAGTTGTAA AAAATTGGGA AACTGTGGTT ACACAACTAC TTCAACCATA TAAAGCACAA TTACGAGAGC TATTCCAAAA ACTAGCTGGG CGACGGGAGG TTAGTGTGAA GATTTTTTGG GATAGCAAAG CTGAATTACA AGCCATGATG GATTCTCATC AAGACTTAAA ACAGAAGCGA GACCAAATGG AAGGAAAGGC ATTAAGTATG GAGGAGGTAA TACAAATTGG ACAATTAATT GAAAGTAATT TACTCAGTCG CAAGGAATCT ATAATTCAAG CCTTTTTTGA TGAGCTAAAA CCCTTAGCAG ATGAGGTTAT TGAAAGTGAC CCAATGACAG AAGACATGAT TTATAATGCG GCATTTTTAA TTCCTTGGGA AAACGAATCT ATATTTAGCC AACAAGTCGA AGCTATTGAT CATAAATTCG GTGAACGTTT ACGCATTCGC TACAACAACT TTACAGCACC TTATACATTT GCTCAAATTT CTTGA
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Protein sequence | MSSGLYLYGI FPDPIPETVA LQGLDSQLVY SQVIDGFTFL YSEAQQEKYL ASRRNLISHE KVLEQAMHAG FRTLLPLRFG LVVKNWETVV TQLLQPYKAQ LRELFQKLAG RREVSVKIFW DSKAELQAMM DSHQDLKQKR DQMEGKALSM EEVIQIGQLI ESNLLSRKES IIQAFFDELK PLADEVIESD PMTEDMIYNA AFLIPWENES IFSQQVEAID HKFGERLRIR YNNFTAPYTF AQIS
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