Gene Ava_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0050 
Symbol 
ID3683559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp58205 
End bp58576 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content38% 
IMG OID637715377 
Producthypothetical protein 
Protein accessionYP_320571 
Protein GI75906275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.511576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAC TCACTTATAC CGAAAATAGC GTTAGTTTAG ATTATCTCGA CATACCTTTA 
GAAAATTGGG TAAATCAAAG AGTAAATTTA GCTCTCAGCA CTGGCACAAA TATCTACACG
GAACCAAGCA CGGCGGCTTT TCTATTACCT ATCGAATCAT CCCCCCTAGC TGTTTTAGAA
AAGTTAGCCC AAGCCAACTT GATAGATTTC TATCCTTGTG ATCCCTCATA CTTTGAAGTT
ACTCTCCAAG GTATATACAT AACATCAACT GAAAACAGTG AAACAGGGGT TTTCGTTACA
GATTTGATTT CATCTGTAGA ATTATTACTC CAACAATTAT CTCAAAGGCA GCAACTCTGC
CACGCTCAGT AA
 
Protein sequence
MLKLTYTENS VSLDYLDIPL ENWVNQRVNL ALSTGTNIYT EPSTAAFLLP IESSPLAVLE 
KLAQANLIDF YPCDPSYFEV TLQGIYITST ENSETGVFVT DLISSVELLL QQLSQRQQLC
HAQ