Gene Ava_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0047 
Symbol 
ID3683556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp53372 
End bp54271 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content40% 
IMG OID637715374 
Productphosphate ABC transporter permease 
Protein accessionYP_320568 
Protein GI75906272 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.519128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.369042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATA GTTATCAATC AAATGATTCC TTGGCATCTG AGACAGAATT TACTGATAAT 
GTTGATAGAA GAGAGACTTT AGGAAAAATA TTTGAATTAG TTTTTTTGTT AGGATTATTG
ATTGGTATAT TCGTCCTAGC ATTGCTACTA TTTGATATTT TTGGAGACGG ATTAGGTAGA
TTTTTAACAC CTGGTTTTCT GACAGAAACC CCTTCTCGCT TTCCTGACGA AGGTGGTATC
CGTCCTGCTA TTATCAGCAG CATTCTTTTG GGACTTGTGG TGATTTTTGT TACTGTTCCC
ATTGGTGTAG GAGCAGCTTT ATATCTAGAA GAGTATGCAC CTAAAGTTTG GTGGACAGCG
ATTATTGAGA TAAATATCAG TAATCTAGCG GGTGTACCTT CTATTGTCTA TGGTTTGCTA
GGTTTAGGGG TGTTTAATTA TTTATTGGGA TTCGGCCCCG CTTTAATTTC TGGAGCCTTG
ACTTTATCTT TACTGTCTTT ACCAGTGATT ATTGTCACCT CTAGAGAAGC TATTCGCGCT
GTTCCTGATT CCTTAAGAAA CGCTTCTTAC GGATTAGGTG TTACCAAATG GCAAACTATC
CGCAGTCATG TCATACCCTA TGCTATTCCC GGTATCTTGA CCGGGGTGAT TATCTCAGTG
TCTCGTGCCA TCGGTGATGC AGCCTCGTTA ATTGTTGTAG GTGCTGTGGG TTTTCTCACT
TTCGATCCTG GTTTGTTCCA GAGATTTATG GCACTACCTA TTCAAATTTA CAGTTACATC
ACTCGTCCTG AACCGGGTTT TGCTAGTGCA GCAGCAGCAA CAATTATTGC ACTTTTGAGC
TTGATTTTAC TCTTAAATGG TGTGGCAATT TATATCCGAC AGCGATTTTC CCTTCGTTAA
 
Protein sequence
MANSYQSNDS LASETEFTDN VDRRETLGKI FELVFLLGLL IGIFVLALLL FDIFGDGLGR 
FLTPGFLTET PSRFPDEGGI RPAIISSILL GLVVIFVTVP IGVGAALYLE EYAPKVWWTA
IIEINISNLA GVPSIVYGLL GLGVFNYLLG FGPALISGAL TLSLLSLPVI IVTSREAIRA
VPDSLRNASY GLGVTKWQTI RSHVIPYAIP GILTGVIISV SRAIGDAASL IVVGAVGFLT
FDPGLFQRFM ALPIQIYSYI TRPEPGFASA AAATIIALLS LILLLNGVAI YIRQRFSLR