Gene Ava_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0043 
Symbol 
ID3683552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp49261 
End bp49602 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content42% 
IMG OID637715370 
Producthypothetical protein 
Protein accessionYP_320564 
Protein GI75906268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.35876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTC AAAAATCCAG CAAAATCAAG TTCATTTTCA GCATGATTGC AATGACAAGC 
ATTGCAGCTT TAAACCCAGC AGTTAATGCT CAAACTCCCC AACCTGGTGC TGTTGATAAT
TTCCTGAACC GCGCTAATTT AAGTACTGAT TCTATCAAAG TGCGTCCAGG GGCAGTTGAT
AATATAACTC CTTCTGTACA GAAACTTCCA GGGACTATAA AACCGGGTGG AGCAAACGCA
CATAATGCAG GTTGTGTTAA CGCAGGTTGC TCTGAACGCC TACCTGATAA CGGACGCAGA
GTTATTAGTC CAGCTACTTT TAAGGATCAA ATCCGTAAGT AA
 
Protein sequence
MSTQKSSKIK FIFSMIAMTS IAALNPAVNA QTPQPGAVDN FLNRANLSTD SIKVRPGAVD 
NITPSVQKLP GTIKPGGANA HNAGCVNAGC SERLPDNGRR VISPATFKDQ IRK