Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0042 |
Symbol | |
ID | 3683551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 47745 |
End bp | 49103 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637715369 |
Product | radical SAM family protein |
Protein accession | YP_320563 |
Protein GI | 75906267 |
COG category | [R] General function prediction only |
COG ID | [COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.467834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTTT CACATTATCA TGTAGTAACA CAACCATTTT TCGATGAAAT TGAAGAACGA ACAAAGCGCG TTATCTTTTC TAGTCGAACA TCAAATGTCA GAATTATTGA TGAGCATAGT TGGCACATTT TAGCTAGTGG TGATTTTGCT CAATTACCTC AATATATATT GTTTGATCTA GTTGATGTTG AACTAATTGT ACCTGATGAT GAAAACGAAT TACAAACTAT TTTAGATTAC AATAATGCCT TAGCAATTGA TAACGATGAT CTACATTTAG TTGTTCAACC AACTGCTTTT TGTCAACTGG GTTGTCATTA CTGTGGTCAG GAACATACTA GCAAAATGAT GACCGAAGAT GAGCAACAAA AATTTATAGA ACGAACTGCT AAAAAACTCG CCAGCAAGAA CTTTCGTAGT CTCTCAATTG GTTGGTTTGG TGCAGAACCT TTGGTAGGTC TGCCAGTGAT GAGAACTCTT ACGCCAAAAC TACAGGCTCT TGCGGCCAGT TTTGGTTGTA GTTATCATGC AAAAGTTGTC ACCAATGGTT TAGCTTTAAC ACATCAAGTA GCAACGGAAA TTGTTCAAGA ATTAGGCGTA AATTCTGTTG AAATTACTCT TGATGGCACT GGTGAATATC ATGATGTTCG GCGGATGCAG AAAAATGGCT TACCTACATT TGAGAAAATT TTTGCTAATA CGGTTGCCTT AGCTCATCGG CAAGATTTGG ATGTACAAAT TAATATTCGT TGTAATGTTG ATTATCAAAA TTATGAATCT GTCTCTTTGT TACTACAAAA ATTAGCTGAG GCAGAGATAC AAGATAAGAT TAATTTCTAT GTTGCACCGA TTCATTCTTG GGGAAATGAT GCTCATACTC GTTCCTTATC GAAAGAAGAA TTTGCTGATT GGGAAATAAC TTGGCTTGGG GAAATGATTG AGTTAGGTTT CAAGGTTGGG CTACTACCAG AGCGCAGACC TCTAGTTTGT ATGGCTGTAA TGCCCCATTC GGAATTAGTT GATGCCTATG GCAATATTTT TAATTGTACA GAGGTGTCTT ATGTTCCTAC ATACGGCACA CCTAATGAAT ATGCCATTGA TCATTTATCA GGTAAACAGA TGCCCGGTAA AAGGGAACGT TTAGCTAGTT TCAATGATAA AGTGCGTCAA GGTGCATATC CCTGTTCTAC TTGCCCCATG CTACCTGTTT GCGGTGGTTC CTGTCCGAAG AGTTGGTTAG AAGGTATTGA ACCATGCCCC AGTGCTAAAC ATAACATTGA GCAACGTTTA TTACTTACCT ATGCGTTATC TCGGATTGAA GAAGCAGAAA CCAACGAGGA GGCTTTAGTT TATGCTTAA
|
Protein sequence | MKLSHYHVVT QPFFDEIEER TKRVIFSSRT SNVRIIDEHS WHILASGDFA QLPQYILFDL VDVELIVPDD ENELQTILDY NNALAIDNDD LHLVVQPTAF CQLGCHYCGQ EHTSKMMTED EQQKFIERTA KKLASKNFRS LSIGWFGAEP LVGLPVMRTL TPKLQALAAS FGCSYHAKVV TNGLALTHQV ATEIVQELGV NSVEITLDGT GEYHDVRRMQ KNGLPTFEKI FANTVALAHR QDLDVQINIR CNVDYQNYES VSLLLQKLAE AEIQDKINFY VAPIHSWGND AHTRSLSKEE FADWEITWLG EMIELGFKVG LLPERRPLVC MAVMPHSELV DAYGNIFNCT EVSYVPTYGT PNEYAIDHLS GKQMPGKRER LASFNDKVRQ GAYPCSTCPM LPVCGGSCPK SWLEGIEPCP SAKHNIEQRL LLTYALSRIE EAETNEEALV YA
|
| |