Gene Ava_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0041 
Symbol 
ID3683550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp46754 
End bp47752 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content42% 
IMG OID637715368 
Producthypothetical protein 
Protein accessionYP_320562 
Protein GI75906266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0997117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAATA CTTCTAGTCA ACTCCTAGCA GAAATCACAG AAAGTTATCG CCAAGGGTGT 
ACTGCAACTA TGAATATACC CGCAGGTAGT GGTGATTTAT TTAGCGAAAA ACTAGAAGCT
TTGATGGCGC AACGTTTACC CTTACAAGAG CAATTATTAC TGCGTCGCTA TAGTAATGCT
CGTAGTCAAG GGATGGTAGC TGCTCGCCAC CGCCAACTGA CAACAGCCGC GCAGTTATTT
GAGGAAGCCC GTAAACCTTT GCAAATGGCT ACACTGTCAC GGGAATCTAA GCTACTACAT
CAGTCATTTT TAGAACAATC AGCAGCTTAT CTCGATTATT GTCATCAGAA TTTTGACCAA
GTTTACAGTC GCACTGAGGA GGCTTTAAGA TTAAGTGCAA TTTTAGAGGA AGAATATGGT
TATGATATTC TCCTGATGCA GCGTATCCAA CTGTTACACA ATCTAGTGCG GACAGAAGCA
CGACGATTAA ATTTTACAGG AGCGATCGCA CTTGCTGCTC AACTTCTTGC CTATCTTGAT
GGACAATTGC AGACTTTACC TACTCCCCAT CCTTGGGGTT TTGAACGCAT AGCACGCCAA
CCTCCTGAGT TTGTCTCTGT TATGTTTGCC CAAATTACTG GTGAAGTTGC TTTAATTTTG
GCAGGTCAAG ACCGCAAGCA AGTAGCTAAT TTGTTAACAA TTGCGGCAGA TTATTTACAG
TTACCAGTTC ACACTGAAAA ATCTCGCTAC CCACGTTCCT ATGCTTGGTT TTCCATCAAA
CAAGCATTTG TGGAGCAAGA TATCACCACT TTTCTCACAC AAGCTGCTCA GTTTATTGCT
CAAGGACGTG CTGATACACC TCTGCTTTGG TACACAATAA TTAATGATTT GTTGGCTTTA
TGCAATGAGC AAGGTTGGTT AGATTTTCGT CAAGAAATTG TCCAAGATTC ACTGTCTTGG
AATGATTTGC CACACAAACT TATTCTAATG AGAAGTTGA
 
Protein sequence
MLNTSSQLLA EITESYRQGC TATMNIPAGS GDLFSEKLEA LMAQRLPLQE QLLLRRYSNA 
RSQGMVAARH RQLTTAAQLF EEARKPLQMA TLSRESKLLH QSFLEQSAAY LDYCHQNFDQ
VYSRTEEALR LSAILEEEYG YDILLMQRIQ LLHNLVRTEA RRLNFTGAIA LAAQLLAYLD
GQLQTLPTPH PWGFERIARQ PPEFVSVMFA QITGEVALIL AGQDRKQVAN LLTIAADYLQ
LPVHTEKSRY PRSYAWFSIK QAFVEQDITT FLTQAAQFIA QGRADTPLLW YTIINDLLAL
CNEQGWLDFR QEIVQDSLSW NDLPHKLILM RS