Gene Ava_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0038 
Symbol 
ID3683547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp39537 
End bp39920 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content40% 
IMG OID637715365 
Producthypothetical protein 
Protein accessionYP_320559 
Protein GI75906263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0299987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTC AAATTTATAG TGTAGCGATC GCATTACCAA CTATATTACT CAGTGCATTG 
CCCAGTTTGG CAAGCAATAA TTATAACGCT TCCCAGATTC AGAGACTAGA TGCTAGTTAC
GTTGCCCAAA TACAAAGTAC TGGTGCAGAT GAAGTATCAA GACCTAGACC CCGTGGCCCC
GGTGGTCATG AAATCGAGGC TGTACAAGAA ACAACTATAA TTAATCCATC AGGATTACGG
GAACGTCCTA GACCAAGAGG GCCAAAGGGT TCTGAAGACG GAATTAATGC AATACAAGGG
CAATTCCTTC ACTTATCACC TACTCTTTTA GAGCAACCTA AACTAGAGGG TGTTCAAAAT
ACTAAATTTA AAACTCAATA TTAA
 
Protein sequence
MNSQIYSVAI ALPTILLSAL PSLASNNYNA SQIQRLDASY VAQIQSTGAD EVSRPRPRGP 
GGHEIEAVQE TTIINPSGLR ERPRPRGPKG SEDGINAIQG QFLHLSPTLL EQPKLEGVQN
TKFKTQY