Gene Ava_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0036 
Symbol 
ID3678881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp36622 
End bp38565 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content40% 
IMG OID637715363 
ProductUDP-galactopyranose mutase 
Protein accessionYP_320557 
Protein GI75906261 
COG category[S] Function unknown 
COG ID[COG3349] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.404508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TACCTAATTT GCCAGAGTCT ACTAATAATA TATCCCGTCG CACCCTTTTA 
AAGGTGTTTG GTGTTGGTGC AGTTGCAGGA GTAACAGGAT ACTCTCGCTT TACTAAGCCT
AAGCCAACGG TATTTCAAAA AGATACCTTG AGTTTGCCAC GGTTACTGAA TCAAGCAAAA
AGTGTCATAG TTATCGGGGG TGGTTTAGCG GGTTTAGCTT GTGCGTATGA ATTGAGTCAA
CGGGGGTTTA CAGTCACACT GATAGAAAAA TCACCCCAAC TCGGTGGTAA AATTGCTAGC
TGGCAAATAG AAGCCGTGGG CGAAACCTTC ATGATGGAAC ATGGCTTTCA TGGCTTTTTT
CCTCAGTACT ATAATTTGAA AAGTATAGTT GCAGAACTGG GAATAAATGA TAATTTTCAA
TCATTAAACT TTTATTCAGT TGTTTATCGA GGAGATCAAT ACAAACCAGA GGTTTTTCGT
CCTAGTCATT CAGCCTTTCC TTGGAATATT GTAGACTTAG CGATCGCCTC TCCTAATCGC
TTCCAATGGG GAATTAATTT AACTAAGATT AAACACCTAC AAGTATTTCA AGCCATCACA
GGTTTTCAGC GAGAAAAGAA CTATCAACGC TTCGATAATA TATCGGTGGC TGATTGGGTA
AAAACAGAAT TTCCCCAAGG TTTGTACGAT TTGTATTTTC TCCCATTTGC TAAGTCTAGC
TTGAACGCAC CAGATACAAT GAGCGTGGGA GAATTAATGC AGTTTTTCCA TTTTTATTTT
TTTGGCAATC CAGAAGGACT GGCTTTTAAT GGTACGAAAG ATGATATGGG GACAAGTTTA
GTCCAACCCA TTGCCAACAG TGTGAAAAAT AAGAATGGGA CAATTCTTAC TGATGCAACG
GTGAGCGAAA TTATTGCCAA AGATGGTAAA ATTCGAGGTT TGAAATATTA TGTTGGCAGT
AATCAAAATA ATGTCCCTTT TTGGGTAAAA CGTAACTCAG TGATTACTGA AGAAAAAACA
GAGTATTTTG GTGCGGCTGA TGAAGTATTT GCTGTGGAAT CTGCTAGCGA AACAGCAATT
TCTTTAACTT GTACTCATCA AGGTTGTACT GTGAAAAAAT CCACAGATGG TAAATACCGT
TGCCCTTGTC ATGGGGCAGA ATTTGCGGCG GATGGTAAAG TGTTGAAGGG GCCAGCCAAG
CGGGATTTAC AAAAGTTGCA AGTTGTACAA AAACAAAATG ATGAATTGCA ACTGTTAGCT
ACAACTAATG ATGCACTGTT ACCAGAGACA ATCACCGCAG ATTATTACGT GTTTGCCACA
GATGTGCCTG GAGTACAACA ATTATTTAAG CATATTAGTG GAGATGTAGA TCAAACAGTG
CGATCGCAAG TAGAAAACTT GAGTATCGCT GATCCTTTTG CTGTGTGTCG TTTCTGGTTT
GATCAAGATT TTGAGTGGGA ACAAAGTAAC TTTACTTCCT TATCTGGCTA TCAGTTAACC
GACAGCATCA CCTTATATCA CCGCATTCAG CAACAATTTA TTGATTGGTC ACAAAAAACT
GGCGGTAGTG TGGTAGAGTT ACACGCCTAT TGTTACAAAG AAAAAGAATT TCCCACCCAG
GAAGCTTTGT TAACTACCTT TGAAAACGAA CTATATGACA TAGTCCCCCA GTTGAAACAA
GCAAAACTCC TGCATCGGGA ATTGGTAAAT CAACATAACT TTTCCGGTTA TCCACCCAAT
AGTTATGGAG AACGTCCAGA AACCAGTACA AATATTTCTA ACTTATTGTT TGCTGGTGAT
TGGGTAAAAA TGCCCTTTCC CTGCGGCTTA ATGGAACGCG CCGTCAGTAG TGGTTTAATC
GCAGCCAATG AGATTTTACA CCGGGAAGGT TTGCAGAGGC GATCGCTTTT ATCGGTGAAT
CCAGAGGGTT TGTTGCAGAT TTAA
 
Protein sequence
MSLLPNLPES TNNISRRTLL KVFGVGAVAG VTGYSRFTKP KPTVFQKDTL SLPRLLNQAK 
SVIVIGGGLA GLACAYELSQ RGFTVTLIEK SPQLGGKIAS WQIEAVGETF MMEHGFHGFF
PQYYNLKSIV AELGINDNFQ SLNFYSVVYR GDQYKPEVFR PSHSAFPWNI VDLAIASPNR
FQWGINLTKI KHLQVFQAIT GFQREKNYQR FDNISVADWV KTEFPQGLYD LYFLPFAKSS
LNAPDTMSVG ELMQFFHFYF FGNPEGLAFN GTKDDMGTSL VQPIANSVKN KNGTILTDAT
VSEIIAKDGK IRGLKYYVGS NQNNVPFWVK RNSVITEEKT EYFGAADEVF AVESASETAI
SLTCTHQGCT VKKSTDGKYR CPCHGAEFAA DGKVLKGPAK RDLQKLQVVQ KQNDELQLLA
TTNDALLPET ITADYYVFAT DVPGVQQLFK HISGDVDQTV RSQVENLSIA DPFAVCRFWF
DQDFEWEQSN FTSLSGYQLT DSITLYHRIQ QQFIDWSQKT GGSVVELHAY CYKEKEFPTQ
EALLTTFENE LYDIVPQLKQ AKLLHRELVN QHNFSGYPPN SYGERPETST NISNLLFAGD
WVKMPFPCGL MERAVSSGLI AANEILHREG LQRRSLLSVN PEGLLQI