Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0034 |
Symbol | |
ID | 3678879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 33198 |
End bp | 35723 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715361 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_320555 |
Protein GI | 75906259 |
COG category | [R] General function prediction only |
COG ID | [COG1480] Predicted membrane-associated HD superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.82668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAAT CGTTAAAGAA GAAAAGTTGG GTAGATGCAG TAAATCTGGG CTGGGTGCAT GAACAGCGTT CATCCGTTGT TTTGGCGATC GCTATTGTCT CTCTTACGGG GGTAATTGGT CATAAGTTAT ATAATCAACC AAAGCTGAAA ATAGGGACGG TTGCACCCCA AACGATTAAA GCACCTCGTA CCGCTAGTAT TGAAGATAAA AAACGCACTG AAATTGAACG CAAAGCAGCT CGTAAAAGTT TAACACCAGT GTTAATGGTC GATGTGAGAA CTACCGCACA AATCGGCCAA AACCTAGAGA AAATGCTGGA TCAGGGTAAT GAAATTCGCA TATCGGCTGG TTCTTTCCCT TTTTATGATA CTTCAGTCCT GTCCTTATCT AGCCAACATT ACCTACGCTC TTGTTCTGAT GCAGAATGGC AAATGATGCT GGTGGCTTTA GAAAATACGG GTCAAAAAAG GTTGGGATTG TTCTTAGAAA AACCCAGTAC TCGCAGCCTG CGTAAACAAG AAAATTCCCA GAATTTGCCG AATACGGAAA CACAAACTTC TTTATTATTT CCCCCTCCGA CAGTTTCCCT CGGCCAGGAA AGTCAAGTTC AAGGTGTTTC TCTTGACCCT GGTCAACCAA AAGAAAGTAT ATCTTCCCCA AAAACACAAA ATCCTGAAGT CTCTACAAAC ACTCAGTTTG TGCAAGCGTT GGCAGAATTA GCTACTTTTC GGATGACCAC TGCCAATCAA AATTTACCGA GACTGATCAA TCAAATTACT CAAGCAAGGG AAGCTTACGC CCAAGCTAGT GTGCAAATTT TACACGTAGA TACCATTACA ACACAGACAA TTTATCACGA AACTGTTCTT CTGGAATTGT CAGATTATGA ATGGACCCAA ACACAAAAGG GAATCCGCCA AGGTGCAGAA CGGATTTTAG CCCAAGGTAT TCCTGCGGGT TTGCCTCAGA GTGTTTTACA AAACGCTGTA ACTTTGCAAG TGCAAGCTTT TGTCCCCAAA AGTGCGGAAT CTTTAGCGAC TAAACTATTG TTGGCTGTAC TGGAACCGAA TCTGAAGAAA GATGAGGAAC AAACCAGAGA ACACGCTCAA AAAGCTGCAT CTGTGGTTGC ACCTGTGATG GTTGAGGTGA AACAAGGTGC AGTTATTGTC AAGAAAGGGA AAGAAATTAC TGAGTGGGAT TTTGAGGTAT TAGAGCATTA TCAACTGATT AGCCGCGAAA ATAACTGGTT AGCTTTGCTG AAATTAGGCG GTTTGGTGAC TGGGGGAGTT TGTATATTTG TCCTAGTCGA AACACGAAGT AAATGCCCAC TCAGACAACG CGATCGCCTG TTAGTTTTGT TACTGACCTT GAGTACGCCA GGAGTCCTGG CAATGGGTGT GTCCTATACG ACTTGGGGCG CTGTCGGTTT GCTGTTGGGT AGCTTTTATG GCCGTGAGTT GAGTATGACA GTTATCTGCT TACTTTTGTT CATTTTACCC ATGAGTATGG AAATCAGCAC TATTGGACTA GTAGCTGGTG CGGCTGGGGG AATTTTAGGT AGTTACATCG CCCACAGATT GCGATCGCGT GAGGAATTAG CCCTTTTGGG TGGGGCGATC GCTATTACCC AAGGTGGAGT TTACCTACTG ATGAAAGTCT TGATTGGTGC GGCTTTTGGT TCCTCCTGGT ATCTCATCCT CCAAGAAGCA GGGTTATTTA CTTTATCGGG ACTAGCTTGG AGTGTTGTGG CTTTGGGTTT AAGTCCTTAT TTAGAAAAGC TATTTGATTT AGTTACCCCC ATTCGCTTGG CAGAATTAGC AAATCCCAAT CGACCTTTAT TAAAACGGTT AGCGACGGAA ACACCAGGGA CATTTCAACA TACCCTATTT GTGGCAACCC TGGCGGAAGC TGCGGCAAAA CACCTGGGAT GTAATGTGGA ATTGGTGAGG GCTGGGACTT TGTATCACGA TATTGGCAAA ATGCACGACC CCCTGGGCTT TATTGAAAAC CAAATGGGGG GGCCAAATAA ACACGAAACG GAAATCAAAG ACCCGTGGAA GAGTGCAGAA ATTATTAAAA AGCACGTCAG TGAAGGCTTG GTAATGGCGC GGAGACATCT TTTACCCACA GCGATTCAAG CCTTTATCCC CGAACATCAA GGGACAATGT TAATTGCCTA TTTTCATCAT CAAGCAGAAC AGATGGCACA GACAGACCCT AATATTGTCG TCAATGAAGC CGATTTTCGC TATGACGGCC CGATTCCCCA ATCGCGGGAG ACAGCCATAG TGATGTTGGC TGATGCTTGT GAAGCTGCAT TGCGATCGCT CAAGGATGTA AATACTGAAC AAGCTTTAAC TGTTCTGAAT AATATTCTCC GCGCTAGATG GCAAGATAAT CAACTCATTG ATTCAGGTTT GACGCGGGAA GAAATGTCAC AAATTGCCGA AATTTTTGTA GAAGTTTGGC AACAGTTTCA TCATAAACGG ATTGCTTATC CCAAAATGAA GTCTGGTAAG GGGTAA
|
Protein sequence | MAKSLKKKSW VDAVNLGWVH EQRSSVVLAI AIVSLTGVIG HKLYNQPKLK IGTVAPQTIK APRTASIEDK KRTEIERKAA RKSLTPVLMV DVRTTAQIGQ NLEKMLDQGN EIRISAGSFP FYDTSVLSLS SQHYLRSCSD AEWQMMLVAL ENTGQKRLGL FLEKPSTRSL RKQENSQNLP NTETQTSLLF PPPTVSLGQE SQVQGVSLDP GQPKESISSP KTQNPEVSTN TQFVQALAEL ATFRMTTANQ NLPRLINQIT QAREAYAQAS VQILHVDTIT TQTIYHETVL LELSDYEWTQ TQKGIRQGAE RILAQGIPAG LPQSVLQNAV TLQVQAFVPK SAESLATKLL LAVLEPNLKK DEEQTREHAQ KAASVVAPVM VEVKQGAVIV KKGKEITEWD FEVLEHYQLI SRENNWLALL KLGGLVTGGV CIFVLVETRS KCPLRQRDRL LVLLLTLSTP GVLAMGVSYT TWGAVGLLLG SFYGRELSMT VICLLLFILP MSMEISTIGL VAGAAGGILG SYIAHRLRSR EELALLGGAI AITQGGVYLL MKVLIGAAFG SSWYLILQEA GLFTLSGLAW SVVALGLSPY LEKLFDLVTP IRLAELANPN RPLLKRLATE TPGTFQHTLF VATLAEAAAK HLGCNVELVR AGTLYHDIGK MHDPLGFIEN QMGGPNKHET EIKDPWKSAE IIKKHVSEGL VMARRHLLPT AIQAFIPEHQ GTMLIAYFHH QAEQMAQTDP NIVVNEADFR YDGPIPQSRE TAIVMLADAC EAALRSLKDV NTEQALTVLN NILRARWQDN QLIDSGLTRE EMSQIAEIFV EVWQQFHHKR IAYPKMKSGK G
|
| |