Gene Ava_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0027 
Symbol 
ID3678872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp26778 
End bp27077 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content47% 
IMG OID637715354 
ProductRNA-binding region RNP-1 
Protein accessionYP_320548 
Protein GI75906252 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.128331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAT ACGTAGGGAA TCTGTCCTAC AGCGTCACAC AAGACGACCT TACTAAAGTA 
TTTTCCGAGT ACGGTTCAGT CACACGCGTT CAGTTACCAA CAGATAGAGA AACCGGACGT
GTTCGCGGTT TTGGTTTCGT AGAAATGGAA TCATCAGCCG CAGAAGATGC AGCTATTCAA
GCTCTTGATG GCGCAGAATG GATGGGGCGT GTACTTAAAG TTAATAAAGC TCGTCCACGG
GAAGAGAAAG GCGCTCGTTC CGGTGGGGGT AATTGGTCAA GAAATAATGG TGGCTACTAA
 
Protein sequence
MSIYVGNLSY SVTQDDLTKV FSEYGSVTRV QLPTDRETGR VRGFGFVEME SSAAEDAAIQ 
ALDGAEWMGR VLKVNKARPR EEKGARSGGG NWSRNNGGY