Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0027 |
Symbol | |
ID | 3678872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 26778 |
End bp | 27077 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637715354 |
Product | RNA-binding region RNP-1 |
Protein accession | YP_320548 |
Protein GI | 75906252 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.128331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATAT ACGTAGGGAA TCTGTCCTAC AGCGTCACAC AAGACGACCT TACTAAAGTA TTTTCCGAGT ACGGTTCAGT CACACGCGTT CAGTTACCAA CAGATAGAGA AACCGGACGT GTTCGCGGTT TTGGTTTCGT AGAAATGGAA TCATCAGCCG CAGAAGATGC AGCTATTCAA GCTCTTGATG GCGCAGAATG GATGGGGCGT GTACTTAAAG TTAATAAAGC TCGTCCACGG GAAGAGAAAG GCGCTCGTTC CGGTGGGGGT AATTGGTCAA GAAATAATGG TGGCTACTAA
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Protein sequence | MSIYVGNLSY SVTQDDLTKV FSEYGSVTRV QLPTDRETGR VRGFGFVEME SSAAEDAAIQ ALDGAEWMGR VLKVNKARPR EEKGARSGGG NWSRNNGGY
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