| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0026 |
|---|
| Symbol | |
|---|
| ID | 3678871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 25498 |
|---|
| End bp | 26658 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637715353 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_320547 |
|---|
| Protein GI | 75906251 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.127901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTT ACGACTGGAT TGTTGTTGGT GGGGGAATGA CGGGTGCTGT ACTCGCCTAC
GAATTGGTGA AAACAGGCTT TAGTGTACTG CTATTAGAAA AAGATGCTGT AGCTGAGAAT
GCTACTCGTT ACAGTTATGG TGGACTTGCC TATTGGTCGG GGAGTACACC ATTAACCAGA
CAATTATGCC AGGAGGCGCG CGATCGCTAC AACATTCTTC CCCAAGAGTT AGATGCTGAT
ATTGAATTGC GAGAATTGGA TTTATTATTA ACAATTCCTG CGGACAGTGA CCCACAGGTT
ACAGCAGAGT TATATGCTCA GTGTGCAGTA CCGCCATGCT TGTTAAGTGT ACCAGAAGCT
TGTGAGTTAG AACTACTGCT GAACCCAGGA GCGATCGCAG GTGCGTTAAC TGTCAAACAT
GGTCATATTC ATCCCCAAAA AACTGTGCAA GCTTACATTC AAGCCTTTTT GCGTGCTGGG
GGTGAGTTGC AAATAGGTGA AGTATCGCAA GTAACCTCAG GTGGCGTTAA GACGACTACT
GTAACTTATC ACAGTGCTAA TGTAGTCGTT TGCGCTGGCG GACTCAGCCG ACGGTTATTA
AAATCCGTAG GTGTTTCCAT TAAAGTGTAT TTTACCCATG CAGAAATAAT TGAAACTCCC
CCTGTTGATT TGCGGTTAAA TACTTTAGTA ATGCCAGCTA ATTTACAGCG ATTTAAATTA
GAGTCTACAT CTACTGAAGT TGATGAATTA TGGAATAAAC CCGGTAATCA ACTAGCACCA
CCTATATTAG ATGCAGGTGC AATTCAGTTT TTAGATGGGA GTTTACGCTT GGGACAAATT
AGTCGTGTGC TGACAGATGT GGATGCTTAT ATCAACCATG AAGAAAGTGA GGATTGGTTG
CGACAAAGTA TTAGTCATAT TTTACCCATC TTGGGTAATT TACCAGGAAA TTGGCATCAT
TGTTTAGTTG CATTTAGTAG TAATAGCTTA CCTGTAATTG GTGTGATTTC CGAATTACCA
GGTGTGCATA TTTTTTCTGG TTTCAGCAAT CCTTTAGTTT TGATACCACC CTTAGCACAG
CGCTTTGCTA AATTTTTATC TGGTACAGAA GATGATATTA TTCCCCAATT TTCTGATTTT
TTAATTTTGA CTGGGAGTTA A
|
|---|
| Protein sequence | MKTYDWIVVG GGMTGAVLAY ELVKTGFSVL LLEKDAVAEN ATRYSYGGLA YWSGSTPLTR
QLCQEARDRY NILPQELDAD IELRELDLLL TIPADSDPQV TAELYAQCAV PPCLLSVPEA
CELELLLNPG AIAGALTVKH GHIHPQKTVQ AYIQAFLRAG GELQIGEVSQ VTSGGVKTTT
VTYHSANVVV CAGGLSRRLL KSVGVSIKVY FTHAEIIETP PVDLRLNTLV MPANLQRFKL
ESTSTEVDEL WNKPGNQLAP PILDAGAIQF LDGSLRLGQI SRVLTDVDAY INHEESEDWL
RQSISHILPI LGNLPGNWHH CLVAFSSNSL PVIGVISELP GVHIFSGFSN PLVLIPPLAQ
RFAKFLSGTE DDIIPQFSDF LILTGS
|
|---|
| |