Gene Ava_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0025 
Symbol 
ID3678870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp24781 
End bp25518 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content35% 
IMG OID637715352 
Producthypothetical protein 
Protein accessionYP_320546 
Protein GI75906250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.1702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCC CAGTAGAAAT AAACTTATCT GAAGGTTTAT TACAACATTG GCACACAGCA 
AAGGGTTATG TTGACCAAAG CGTTAACTCT TTAACTGACT CAGCACAAAA ACTTGGACAA
TCTTTACAAG AAACGACTAA TACGAACACT GATAAAGCTA TTGATGTCGT TACAAAAACT
CTAGGACAAA GCTGGCAAAC GGCAGAGCAA ATTAAGAGTA CAACATCTGT GGCGCTAAAA
ACAGCCATTG ATGCTTCTGT TAATGATTGG CTAGTACAAC ACCCTACATT TTGGCGATTA
GTGCAAATAT TAGGTTGGGC AACTAATCAC CCAATTATCA GTTTTATAAT TCTACTATTT
GCCATAGCTG TTATTTGGAA CATTATCAAA GCAATAATGT ACTTAATTGA AACAGCTAGC
TGGTCAATTT TGCAATTACC ATTAAAATTA ATTCAAGCTT TGATTCAAGG GGTTGTTTTA
GCTGTAACTA AAATTGTTAG CCTTGGTATA CAAAAAATCA GCAATTCTCA CATCATGGAT
GATACAAAAG CTTTGCCAGT GACAAGCACT GAAGTTTTTG CTCAATATAA ACAGCAAAGA
TTGATAGATA TTTCTCATCG CCTGGAAGAA ATTCAACAGG AACAGCAACA GCTTTTACAA
GAAGCTCAAG AGCTAATTGC TTCAGATACA ATTGAGGTAA AACTTCCAGA AATAAAATTA
ACTCCCAGTC AAAATTAA
 
Protein sequence
MSPPVEINLS EGLLQHWHTA KGYVDQSVNS LTDSAQKLGQ SLQETTNTNT DKAIDVVTKT 
LGQSWQTAEQ IKSTTSVALK TAIDASVNDW LVQHPTFWRL VQILGWATNH PIISFIILLF
AIAVIWNIIK AIMYLIETAS WSILQLPLKL IQALIQGVVL AVTKIVSLGI QKISNSHIMD
DTKALPVTST EVFAQYKQQR LIDISHRLEE IQQEQQQLLQ EAQELIASDT IEVKLPEIKL
TPSQN