Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0025 |
Symbol | |
ID | 3678870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 24781 |
End bp | 25518 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637715352 |
Product | hypothetical protein |
Protein accession | YP_320546 |
Protein GI | 75906250 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.1702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACCCC CAGTAGAAAT AAACTTATCT GAAGGTTTAT TACAACATTG GCACACAGCA AAGGGTTATG TTGACCAAAG CGTTAACTCT TTAACTGACT CAGCACAAAA ACTTGGACAA TCTTTACAAG AAACGACTAA TACGAACACT GATAAAGCTA TTGATGTCGT TACAAAAACT CTAGGACAAA GCTGGCAAAC GGCAGAGCAA ATTAAGAGTA CAACATCTGT GGCGCTAAAA ACAGCCATTG ATGCTTCTGT TAATGATTGG CTAGTACAAC ACCCTACATT TTGGCGATTA GTGCAAATAT TAGGTTGGGC AACTAATCAC CCAATTATCA GTTTTATAAT TCTACTATTT GCCATAGCTG TTATTTGGAA CATTATCAAA GCAATAATGT ACTTAATTGA AACAGCTAGC TGGTCAATTT TGCAATTACC ATTAAAATTA ATTCAAGCTT TGATTCAAGG GGTTGTTTTA GCTGTAACTA AAATTGTTAG CCTTGGTATA CAAAAAATCA GCAATTCTCA CATCATGGAT GATACAAAAG CTTTGCCAGT GACAAGCACT GAAGTTTTTG CTCAATATAA ACAGCAAAGA TTGATAGATA TTTCTCATCG CCTGGAAGAA ATTCAACAGG AACAGCAACA GCTTTTACAA GAAGCTCAAG AGCTAATTGC TTCAGATACA ATTGAGGTAA AACTTCCAGA AATAAAATTA ACTCCCAGTC AAAATTAA
|
Protein sequence | MSPPVEINLS EGLLQHWHTA KGYVDQSVNS LTDSAQKLGQ SLQETTNTNT DKAIDVVTKT LGQSWQTAEQ IKSTTSVALK TAIDASVNDW LVQHPTFWRL VQILGWATNH PIISFIILLF AIAVIWNIIK AIMYLIETAS WSILQLPLKL IQALIQGVVL AVTKIVSLGI QKISNSHIMD DTKALPVTST EVFAQYKQQR LIDISHRLEE IQQEQQQLLQ EAQELIASDT IEVKLPEIKL TPSQN
|
| |