Gene Ava_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0021 
Symbol 
ID3678866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp18581 
End bp19231 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content42% 
IMG OID637715348 
ProductTenA family transcription regulator 
Protein accessionYP_320542 
Protein GI75906246 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAATT TTGAATTGGA GCGAAGCGAC TTGACTCTCT CAAATCAACT TTGGACAACA 
AATCAAGATT TAGCCGCAGC TTGTCTAGAG CATCCCTTTG TTCAAGGTAT TGGTAATGGT
AGCCTGGAGA AGCAGAAATT TGCTTATTAT GTAGGGCAGG ATGCTTTTTT CTTAGAAGCC
TTCGCCCGTG CTTACAGTAT TGCTGCGGCT AAATCACCAG ACTGGATAGG TTTTACTACG
TTTCACAATT TAGCTGGTGG TGTATTGGCA GAGATGCGTC TACATGAAAG CTACGCAGTC
CAATGGGGAA TTGATTTACA TTCTGTGCAA CCAGGAGTAG CCACCCGTCG CTATACCGAT
TTTTTGTTGG CTACTGCTTG GGGTGGAGAT GTAGGTTTAA CTGCTGCGGC CATGTCGCCT
TGTATGCGTC TGTATGCTTT TTTGGGAGAA CAGTTAGCTA AAAATGGTGT TCCTAATCAT
CAATACGCTG ATTGGATTCG GACTTACAGT AGTGCTGATT TTCTACCATT AGTACAACAG
TTAGAAAGTT TAGTAGAAAA CTATGCTACT GCTAATACCT TAACCAATTC AACTTATCGC
TACGCCATGC TTTGCGAACA AGAATTTTTT CAAGCGGCCT GGATGATTTA A
 
Protein sequence
MLNFELERSD LTLSNQLWTT NQDLAAACLE HPFVQGIGNG SLEKQKFAYY VGQDAFFLEA 
FARAYSIAAA KSPDWIGFTT FHNLAGGVLA EMRLHESYAV QWGIDLHSVQ PGVATRRYTD
FLLATAWGGD VGLTAAAMSP CMRLYAFLGE QLAKNGVPNH QYADWIRTYS SADFLPLVQQ
LESLVENYAT ANTLTNSTYR YAMLCEQEFF QAAWMI