Gene Ava_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0016 
Symbol 
ID3679678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp13928 
End bp15118 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content47% 
IMG OID637715343 
ProductIron-containing alcohol dehydrogenase 
Protein accessionYP_320537 
Protein GI75906241 
COG category[C] Energy production and conversion 
COG ID[COG0371] Glycerol dehydrogenase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.537378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAATC AATTATCTAA TCAAACCTTG TCTACTCAAA CTGCTAGTTC ATTAATCACC 
CTCGCGGTTG CCCCGGCAAA AGTAATCCGT GGCTCTAATA TATTGCAGGT AGCCGCCACA
GAAATTGCCA AGTTGGGCAG TCGTCCTTTA ATTGTGGCAG GTAATAGCAC CGTTGCTATC
AGCCAAGAGA GTCTGCAACC AATTTTAGAA GCCCAGAATC TGCACGTTGC CCAAGCCTCC
TACGGTGCAG ATTGCGCGGA AGCTAGCTTA AAAGCCTTGA GGAAAGCAGC CAAAGAACAT
AAAGCCGATG CCATTATCGG CATTGGTGGG GGTAAAGCTT TAGATACAGC TAAGTTAGTT
GCCCATCAGT TAGATTTACC TGTAGCCACA ATTCCCACCT CAGCAGCTAC CTGTGCCGCT
TGGACGGCGC TATCCAATGT ATATTCTGAA GACGGGGCGT TTCTTTACGA TGTGGCTTTA
TCTCGCTGTC CCGATTTACT AATACTTGAC TACGACTTGA TTCAAACAGC ACCACAACAT
ACACTAGTGG CAGGGATTGG GGATGCGATC GCTAAATGGT ACGAAGCTTC CGTTAGTAGT
GGTCATCTAG AACAAACTTT AATTATCTCC GCAGTCCAAC AAGCGCGAGT TTTACGTGAT
ATTTTATTCC AAAAGTCGGC AATTGCCTTA CAACAACCAG GCAGTGAAGC TTGGCGGGAA
GTTGTTGATG CCACAGTTTT ACTAGCTGGT GTCATCGGTG GACTAGGTGG GGCCCAGTGT
CGTACAGTCG CTGCCCATGC AGTCCATAAT GGTTTAACTC ACATTGCCGG ACACAGTAGC
ATCCACGGTG AAAAAGTCGC CTATGGAATT TTGGTGCAAC TGCGTCTGGA AGAAATGGTG
CAAGGCAATC AACTAGCCAC CGCCTCACGA CAGCAACTAT TAAAGTTTTA TGCAGAGATT
GGCCTGCCAC AAAAATTAGG AGACTTGGGG TTGGGTAATA TTACCTTAGG CGAGTTGCAA
ACAGCCGCCG AAATCGCTTT AACACCTCAA TCTGACATTC ATCGCCTACC ATTCAAAGTT
GCGTTGGAAC AGTTAATGGC AGCGATGGTT TCTACCACTG CACCAACAGA TAGTAGAGAC
TCAGTTCATC GTGTCTCCAC CAGGGGAATA AGTGACGAGG TTGAGGAATG A
 
Protein sequence
MPNQLSNQTL STQTASSLIT LAVAPAKVIR GSNILQVAAT EIAKLGSRPL IVAGNSTVAI 
SQESLQPILE AQNLHVAQAS YGADCAEASL KALRKAAKEH KADAIIGIGG GKALDTAKLV
AHQLDLPVAT IPTSAATCAA WTALSNVYSE DGAFLYDVAL SRCPDLLILD YDLIQTAPQH
TLVAGIGDAI AKWYEASVSS GHLEQTLIIS AVQQARVLRD ILFQKSAIAL QQPGSEAWRE
VVDATVLLAG VIGGLGGAQC RTVAAHAVHN GLTHIAGHSS IHGEKVAYGI LVQLRLEEMV
QGNQLATASR QQLLKFYAEI GLPQKLGDLG LGNITLGELQ TAAEIALTPQ SDIHRLPFKV
ALEQLMAAMV STTAPTDSRD SVHRVSTRGI SDEVEE