Gene Ava_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0012 
Symbol 
ID3679674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp10376 
End bp11389 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content39% 
IMG OID637715339 
ProductSerine/threonine protein kinase 
Protein accessionYP_320533 
Protein GI75906237 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.207373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTG ATGCGTTTAA TAAAGGAGCA ATTCCCTTAA TCAATCATCC AGATTGTTCT 
GCTCTAGGTT ATCAAGTTAT TCGAGAACTG GGACGAAACC AAGAAGAAGG TCGCATCACT
TATTTAGCTC ATCATCATTC TAAGCAACAG GTAGTAATTA AAGAATTCAG TTTTGCTCAT
ACCTATGCTG ACTGGTTTGG TGTGACAGCT TATGAAAGTG AAGCGCAAAT CTTACAAAAA
CTAAATCATC CCCGCATACC CCGCTATCTG GATTCTTTTG CAACGCAGAC AGCTTTCTAT
TTAGTACAGG AATATAAACA CGCTCTACCC TTAAGCTCAA AACGCAGTTT CCAAGCAGAA
GAAATTAAAC AAATAGCTGT ATCAATTTTA GAAATTTTGG TGTATTTACA GCAACGAATT
GACCCAATTA TTCATCGAGA TATCAAACCA GAAAATATTT TAGTTGATGA CCAACTGAAT
GCTTACTTAG TGGATTTTGG TTTAGCTAGG GTACAGGATA CAAAAATAGC TCTCACCAGC
TTACTAACAG GAACACCAGG CTTTATACCA CCAGAGGAAC AATCAGGCTA TTCTTTATCT
TTGGCTTCGG ACTTATACAG TGTAGGGGCG ACACTAGTTT GTTTACTTGC TAATATCCGT
TCTGTGGATA TTGATAAGTT AATCAACAGT AAGGGTTATT TTGATTTTCA AAAACTAGAT
TCTCCCATCG ATTTACGCTT CCGCTCTTGG TTAATGGGCA TGGTGGAACC CAAGTGGCAA
TATCGCTATG CTAATGCCGC AGATGCTTTG GCAGCACTCC AGCCCATTCA AGTTACTGGT
AATGCCACAG CTATGGAAAT ATTAGCCACA GTCATCAAGT TGAAATATCA AACTACAGTT
TTGTGTTTAG CAATAATTGG GGTGCTAGCA GTCGCCGGGG CTACTTTGAT ATTGTCTCAA
CAAGGTGGAA CTGCTCAACA GTTACAAGAG GCTAGGAAAT CAGAAGTTTT GTAA
 
Protein sequence
MELDAFNKGA IPLINHPDCS ALGYQVIREL GRNQEEGRIT YLAHHHSKQQ VVIKEFSFAH 
TYADWFGVTA YESEAQILQK LNHPRIPRYL DSFATQTAFY LVQEYKHALP LSSKRSFQAE
EIKQIAVSIL EILVYLQQRI DPIIHRDIKP ENILVDDQLN AYLVDFGLAR VQDTKIALTS
LLTGTPGFIP PEEQSGYSLS LASDLYSVGA TLVCLLANIR SVDIDKLINS KGYFDFQKLD
SPIDLRFRSW LMGMVEPKWQ YRYANAADAL AALQPIQVTG NATAMEILAT VIKLKYQTTV
LCLAIIGVLA VAGATLILSQ QGGTAQQLQE ARKSEVL