Gene Ava_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0006 
Symbol 
ID3679668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6463 
End bp6915 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content40% 
IMG OID637715333 
Producthypothetical protein 
Protein accessionYP_320527 
Protein GI75906231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.755501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.930196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTC AGTTTCGTGA ATTTGATCAA TTTGATGTGT GGATGTGGCT AAAATTTAGT 
ACCATCCCTT CTCAAAGAGA AAAGCAGTAT GTAGAAGAAG TCTTTAATTC CTGGTTTTAT
TTAGGGAAAT TGGGTGCATT TAATGCCGAA AATCTCCAGG TACAAGAAAC TGGGGTTGAT
TTAAGTTACC TTAATTATGA CTCCCAGGGT TATGACAAAA GCCTATTGGC GCTGATGCAC
AATATGGGTG AGTTGGAGTA TGAAGGACAA TGGGCGCGAT GTTGGTTTGA TTTGGGAACT
AGTGATGCGA TCGCCATTGA TATTTTAATC AATGCTCTCA CTCAACTAAG TGAAGAATAC
GTCACTATTG AAGAATTTTA CATCGGCGGC GAGAATGAAA ATTGGCCGGT CGAAGATAGT
GACAGTCGCC CTCACTCTAT TTACGATAAT TAA
 
Protein sequence
MHIQFREFDQ FDVWMWLKFS TIPSQREKQY VEEVFNSWFY LGKLGAFNAE NLQVQETGVD 
LSYLNYDSQG YDKSLLALMH NMGELEYEGQ WARCWFDLGT SDAIAIDILI NALTQLSEEY
VTIEEFYIGG ENENWPVEDS DSRPHSIYDN