Gene Ava_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0005 
Symbol 
ID3679667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5435 
End bp6238 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content43% 
IMG OID637715332 
Productmethyltransferase 
Protein accessionYP_320526 
Protein GI75906230 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.168517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.967482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTAA ACAAAGCTGT ACTAGTCAAC AAGATAAACT CAAATCATCT TTTTTCTGCA 
TCTTCCCTTA ACCCAACAAT CGATATGTCA CAGTTATTCC CTGGAGAAGT CTTCGCTAAT
ACTGCTGATT TTGACACTGG GATTCGCCAG TTATTACCTC GCTATGATGA AATACTGGAG
GTGATCAGTC GTTGTCTGCC TTTGACAAGT CATCGCATTT TAGACTTAGG TTGCGGTACA
GGTGAACTTA GTCTCAAAAT ACTCCAACGC TGTCCCAATG CTCAAGTCAT TGCTTTGGAT
TATTCACCGC GAATGCTGGA ATTTGCTCAA CATAAAATCG CCTCATCTGG GTATAAAGAA
CGTTGGACTG GTTTACAAGC TGATTTTGGC GACTGGGCTA TCAATCCTGA GACATTGAAT
ATTGGTAATG AATTTGATGC TTGTGTATCA TCTCTAGCAA TTCACCACCT CTATGACGAC
ATGAAGTTAC GGCTATTTCA GCGTATCGCT GCTAGTCTGA CACCAAACGG TTGTTTCTGG
AACGCAGACC CCACCTTACC AGAATCACCT ACCCTTGCAG AAATTTACCA AGCAGCGCGA
GAACAATGGG TAAGTGAACA GGGAAGCAAT TTTACAGAAG TCCGCGCTAA GGTTGGCAAT
AGTAGCCCCC AAGGATACTC CAATCCAGAC CAACTCGCTA CTTTAGATAC CCATTTGCAA
ATGCTGACAA AGTCTGGGTT TACGACGGTA GCAGTACCTT GGAAATATTA TGGTTTAGCC
GTTTTCGGCG GTTGGGTGGA GTAA
 
Protein sequence
MLLNKAVLVN KINSNHLFSA SSLNPTIDMS QLFPGEVFAN TADFDTGIRQ LLPRYDEILE 
VISRCLPLTS HRILDLGCGT GELSLKILQR CPNAQVIALD YSPRMLEFAQ HKIASSGYKE
RWTGLQADFG DWAINPETLN IGNEFDACVS SLAIHHLYDD MKLRLFQRIA ASLTPNGCFW
NADPTLPESP TLAEIYQAAR EQWVSEQGSN FTEVRAKVGN SSPQGYSNPD QLATLDTHLQ
MLTKSGFTTV AVPWKYYGLA VFGGWVE