| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0002 |
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| Symbol | |
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| ID | 3679664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1919 |
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| End bp | 3082 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637715329 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_320523 |
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| Protein GI | 75906227 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.273248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAG TTTGCGCCCA AAGCGACCTC AGTACCAACC TTTCCTTAGT CAATCGTGCT
GTACCATCAC GACCGACTCA TCCAGTACTT GCTAACGTGC TATTACAAGC TGATGCTGAA
ACTAATCAAG TAAGCTTAAC AGCCTTTGAT CTCAGTTTGG GTATCCGTAC TAGTTTTAAT
GCTGATGTAT GGCAAAGTGG AGCGATCGCA CTTCCTGCTA AATTATTGGT AGATATCACC
TCACGTCTGC CAGAGGGAGA GATTACCCTA GATGATGAAT CAGCCACCGA CGGTACAGCA
ACCGGAGAAG GTTTAATAGT TAGCCTAACC CCAAAAACCG GAAAGTATCA ATTACGAGCA
ATGGGAGCGG AAGAGTTTCC CGAATTACCC CTAATTGAAA ACACCACAGC TATTTATCTC
ACAGCTACTT CCTTGATTGA AGGATTGCGT GGTTCATTAT TTGCTACCAG TGGCGACGAA
ACTAAGCAAG TACTCACAGG AGTACATCTG ACCGTTAAAC AAGATACTTT AGAATTTGCC
GCTACTGATG GACATCGCCT AGCCGTAGTC GAAACCACTA ATGAGCGTCC TTTAGAAGAT
AACGACCAGC AATTAGAGGT AACAGTACCA GCTAGAGCCT TACGCGAACT AGAAAGGATG
TTGGCTCATA ATGCCGCCTC TGAGGAACCC ATAGCTTTAT ATTTAGACCA AGGTCAAGTC
ATATTTGCAT GGCAAAACCA ACGTCTAACT AGTCGTACAT TAGAAGGTCA ATACCCAGCT
TATCGCCAAC TCATTCCCCG CCAATTTGAG CGACAAGTAA CCATTGAACG CCGACAATTC
TTAAGCACAT TAGAAAGAAT TGCTGTACTA GCAGACCAGA AAAATAATAT CGTCAAGCTA
ACTATTGATA GTACAGCCCA AGAACTTACC TTATCTTGTG AAGCTCAAGA AATGGGCAGT
GGGAGAGAGT CGATGAATGC CGAAATTGCC GGAGAAGATA TAGAAATTGC TTTTAACGTC
AAGTACTTAA TGGAAGGATT AAAAGCCTTA CCATCTCCAG AAATTCAAAT GCACATCAAC
CAAAATCTCA CACCAGTAAT TTTTACTCCC CTGGGTGGTT TGAAGATGAC TTATTTGGCT
ATGCCGGTGC AATTAAGGAA TTAA
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| Protein sequence | MKLVCAQSDL STNLSLVNRA VPSRPTHPVL ANVLLQADAE TNQVSLTAFD LSLGIRTSFN
ADVWQSGAIA LPAKLLVDIT SRLPEGEITL DDESATDGTA TGEGLIVSLT PKTGKYQLRA
MGAEEFPELP LIENTTAIYL TATSLIEGLR GSLFATSGDE TKQVLTGVHL TVKQDTLEFA
ATDGHRLAVV ETTNERPLED NDQQLEVTVP ARALRELERM LAHNAASEEP IALYLDQGQV
IFAWQNQRLT SRTLEGQYPA YRQLIPRQFE RQVTIERRQF LSTLERIAVL ADQKNNIVKL
TIDSTAQELT LSCEAQEMGS GRESMNAEIA GEDIEIAFNV KYLMEGLKAL PSPEIQMHIN
QNLTPVIFTP LGGLKMTYLA MPVQLRN
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