Gene Ava_C0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0238 
Symbol 
ID3678037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp292690 
End bp293184 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content46% 
IMG OID637715318 
Producthypothetical protein 
Protein accessionYP_320512 
Protein GI75812895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000613951 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00402229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAATATC CGCAGATAAA TATAAAACTT CTGTCTGAAG AAGACCGGGA GTTGGTGAAG 
CAGGCCAAGC AGCGTGCTGA GGAGTTGCGC CTCACTTTTA AGGAGTTTGT GCTGAATTGT
ATTAAACAAG CACTTGTGGA AGAGAGTCCG GATGATGCAG ATAGTGCAAC TGCTGCCGAA
ATTGAAGCTT TGAAAGCTCA AATCGCCGCC CTGGAAGAGA AGGTGAATAT TCCTTCTGCG
ACCAAAACGG AAGTACATAC CCTCCAGGAG CGGTTAAATC AATTGCGGGT GGGAATTTCA
AATGAAATTA AGAAGGATAG GGAGCAACTT GCATCTTTAA CGCTGGCGAT CTCCCGACTT
GAAAGCCAAA TTGAACAGCT AATACCTTCC TTAAATCTTC AAGTGGATGG CGAAGGTAAT
GCCGACAGTG ATAGCGACTG GATTTTTGGG GAAGACTCAA GCAGGTTGGG AGGAGAAGAT
GTTGGGGGTT TTTGA
 
Protein sequence
MEYPQINIKL LSEEDRELVK QAKQRAEELR LTFKEFVLNC IKQALVEESP DDADSATAAE 
IEALKAQIAA LEEKVNIPSA TKTEVHTLQE RLNQLRVGIS NEIKKDREQL ASLTLAISRL
ESQIEQLIPS LNLQVDGEGN ADSDSDWIFG EDSSRLGGED VGGF