| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0236 |
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| Symbol | |
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| ID | 3678035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | - |
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| Start bp | 285538 |
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| End bp | 289209 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637715316 |
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| Product | helicase-like |
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| Protein accession | YP_320510 |
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| Protein GI | 75812893 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.126273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00335967 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGCGG AAGATTTAGG AAGATTATTT GAAATCGGCT TCAATGTTGG CATCCTTGCT
TATATTCAGC AAAACCAATT GAATCACCGA TTCAGAGATT TATATCAATG TGACTTACAA
GCATTGCGGT TTCCACAACT GCATCGACGT ATAGTTGACC GCGCTAACGT AATTAATGAT
AGTGATAGTA AAATCATTGC TAAGTGGAGT GTGTTCTTTC TCCAAAAGGG GTTTTTATCC
GGCTTAAATT TCTTTAGGGA GTACCTGGAA TCAACAGGTT GGAAACAGCG AAAGCTGGAA
ATTTTATACT ACCAGTGTAA CTTTTGTGAT GACAACAGCC TTGGTATTCT TGTTAAGGGT
GAGGAACAAG TCTTTAGAGA TATCTTGTCA CAATTAGGAA ATATCAAGGT TGATATCGGT
CGCTATAAGC AGCAAGGAGA GTTTCTTAGG GCTGATACTT TAATGCTGCT GCACAACGGC
AAACAGTTTC GTATCCTCTC AGTGGATTTA TCAGTGTTCT CGATTAAGTC AGCTGAAGAT
ATTAAAGATT TAGATAATGT AGAAGTTATA CGGCAATTAC TGCTCAGTGA AATTAGTTAT
TTACGCTCAA AAAGTGTTTT CTCTGGACTT AGTATCGACA CGGGAACAGA CACCACAAAA
CTTGGATTAA CCTTTTCTGA AGGGATTGCT CGTTATTTCA CAGCTTTCAA GCGCAAGGAC
AAAGAGAGTG TCAAATTAAT CCAAGCCGCC AGTTATGCTC ATAGCTTCTA TAAGTTTTTA
CGACAGCACT CTCTTCTCCA AGAAGCTGAC TCCGTGATGT TTAACGTTAT GGGTTACACT
GACCGGGGCG TTAGTGCCAT GTCAGTAAAT CGAGAAAATT TAGATATCTT AAATACCTGC
CACCGCATTT ATAAGCAGCA ACAAAGCGGT CAAGCGATCG CCGAAGCTCG TCAACAAGTT
CTCAGAATCA TCAAAAGGAA AGCAGCTGAG AGTTTTGTTG ATGGCAAGAC ATTTATAAAC
TCTCTTTTAG CAGTGCCACC TGACACAACT ACTTTGGTTG CTCACCAGGA GCGAGTAACA
GGGTTTTTCA ACTCAAGCGG GGAAGTGCCG CCTCAATTAA TGGCTCAACT CGGACTGAGT
GGTAGTCTAG ACCTACGTTC GGCTCACACC GCCCTAATTC AAACTGCCCT GACTAATGAC
AATCCTTATG TTTTCTTAAC TGGCAATCCT GGCATTGGTA AAACCACAAC CATTGTAGAA
TTTCTCAAAC AGCATCTCGA CGATGGCTTT TTGTTCTTCT ATGTCAGTCC CAGAAAAAAC
GTTAACAAGG ACGTAATTGA GAAGTTCAAG AGTCAACCGG GAGAATCATT GGGCGGGAGC
ATTGCAGCAC CATTGGAGAA TCACGGACTG TTTTGCATCA ATACCAATGC AGACATTATT
CAAGCTAATG GTGGACACTG TACTGTGCAG TATTTCTCTA ATTTACGAGA AGGGGACTTT
ACAGAGCAAG CTGTTCATTT TATCGATGGT CAAGCTCTTA TTGAGCGGCG TCCCTCAGCT
TCTCAAAGAC TCCAGCGCAA AATGGAAGAT TTAATTCAGG ATGCTGGTGA GCAGACTAAA
GGAGTTTTAG ATAGTATCTG TGAAGCTATT TACACAATTA TAGACCGTCA ACTTTCCAAT
AATATAGTGG CAACAATTTC GCTACAATCT TTGAAAAAAA CGGGAAACGG CCAAGACACT
CTCCGCCATT TTGAGAAGAT ATTTAGGAAC GCCTATAACC AAAGTGAAGG TTCAGTCATT
CCTGACCAAA TGAAGAAAAT CTCTCAACGC ATTAAACATA TATTTATCAT GGTTGATGAG
ATTACAGGAG ACCATAGCGG TGTAGAATTC TTAAACCGCA TCAGTTCTAT CCTTCGCCAA
TATGAGCTGA CTAATTCCCA ATATGGCTTT AATACCAAAA TTATTGTAGC TGATGCTTCT
ATTGTTGACC CAGATGTCAT TCAACAGCAT CTTTCTACTA CAGTTTCAGA ACCAGACAAA
ATCTTTTATC GGCGAGCGTC AGAGAACGAA TCACCCCTTT CAGTACAAAA TTTCAAGTTT
AAGGGATTAG GCGCAACTGT CATCAATTCT AACTCTTACC CTGCTCGTAG TTTAAACATT
ACTTATAAAG TATTTATAGA ATCTTTTAAA TATAGCAATT CAGCTTTTTT AGAGAAAAAC
AATAGCTTAG TTAACCGTGT ACAAGCAGAG ATTGCTGAAG ATATTAATTC TTTCTTGGAT
AACCCAGAAG CTGGACAGGT AATTGTATAT ATCCAGGATA AGCAGAGATT AAAAGAATTG
ACTGAATATC TAAAAAAACA TCGACGTAAT TTTCAGTTAT TTACGGACTA CTTAGAAATT
CACGCTAATA TTTCAGAGCA GGAAAAAGAA GAAATCCAAA AATGTAATAC TGACGTAAAA
GTGGTCTTTA TGACCGCCTC AGCTAGTCGA GGGTTATCAT TTCCTAAAGC TAAACATATT
CTGGTTGATA TTCCTCGCTT TGCCATTGAG CAAAACTTAA TGGAAATTAT TCAGGTAATT
TACCGGGGTC GCGGTAACTA CCTTGAAGAT GGAATGACCA AAACCCTAGA TAATGAGGAG
AAAGATTTAA TTCTTTATTT ATCAGAGCGG GCTGTATATT ACGCTGATGA CCCGGAGCTT
TCTTTACAAG AAAGTGTGCT GAGTCTTGTG AATATTCTAT TAATTTTCAA GACATCTGTC
ATGACAAGAA TTTCTGGGTC TGGGCAGATA GGTAAAGACC ATTTTATGAT GATTCCTATT
GGGGGAAAGT CGGTATTTGC AGCAGGTGAA ACCTTTACGA GTAAGATATC TGGTTTAATC
AAAGAACTGA AGAAAGAGCA TATTCGTCGT CGCAGTGACA AACTTTTGAA AGAGGTTTAT
ACGAGCCTAG AGCAACTGTT AGGTCGTGTA AAGATTATCT TGAGTGATTT AGACAATTCC
CCGCCGACAC CAACCCTTTC TTATCTGTCA ATGCGAGAGT CCTTTGCAGA CCAGTTTGTG
AAGTTGGTAA GTAGTGGTTT GGATCAGCTA TTAAGCTTTG GCCCTGTAGA AGCCAGCCAC
ATTAGTGGCA GTATGCTAGT AGTTTCTTTA GCTAATAAAG CACTTCAAGA AAACTATGAA
ATGCGTCTAG AGCGAGAACT CAAACCTTAT GCTAATAATG AACTTTTAAA AAAGTTATAT
TCTATTAATT CTAATCAAGC CTATCCAGAA AATTTGCGTT CAGCAAGTTT TGGAGCAATT
GAGCTAGTTA ATTTACTTGG AAAACAAATG AGGCGAACAC AGTGGTTTGA GCAAAATAGT
CAGCGTTTTG ACCAGTATTA TGCAATTCCA CTATTTATAT TTACCAGCAA TGAAGCGATT
AAAGACTATT TTTCTAGGGG TGTAGAGGAG CCAGATGGAG AATCATTCCG AGATATTTTA
GCTGAATATA TCCGTTGTAT GTTTCCTGTA GACAACATTT TGCCCATTAG CTCTCAGTAC
GGAGAATTTC CATTTGTTGT TTTTAGGAGC TATAGTTTAA GCGAAATTAG GCACAAGTTA
TTCACAGATA AGCAGCTTTT GACTTCCAAT GAGTTGAATA TATTAAACTT GATTCTTGCT
CAAGAAGACT AA
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| Protein sequence | MIAEDLGRLF EIGFNVGILA YIQQNQLNHR FRDLYQCDLQ ALRFPQLHRR IVDRANVIND
SDSKIIAKWS VFFLQKGFLS GLNFFREYLE STGWKQRKLE ILYYQCNFCD DNSLGILVKG
EEQVFRDILS QLGNIKVDIG RYKQQGEFLR ADTLMLLHNG KQFRILSVDL SVFSIKSAED
IKDLDNVEVI RQLLLSEISY LRSKSVFSGL SIDTGTDTTK LGLTFSEGIA RYFTAFKRKD
KESVKLIQAA SYAHSFYKFL RQHSLLQEAD SVMFNVMGYT DRGVSAMSVN RENLDILNTC
HRIYKQQQSG QAIAEARQQV LRIIKRKAAE SFVDGKTFIN SLLAVPPDTT TLVAHQERVT
GFFNSSGEVP PQLMAQLGLS GSLDLRSAHT ALIQTALTND NPYVFLTGNP GIGKTTTIVE
FLKQHLDDGF LFFYVSPRKN VNKDVIEKFK SQPGESLGGS IAAPLENHGL FCINTNADII
QANGGHCTVQ YFSNLREGDF TEQAVHFIDG QALIERRPSA SQRLQRKMED LIQDAGEQTK
GVLDSICEAI YTIIDRQLSN NIVATISLQS LKKTGNGQDT LRHFEKIFRN AYNQSEGSVI
PDQMKKISQR IKHIFIMVDE ITGDHSGVEF LNRISSILRQ YELTNSQYGF NTKIIVADAS
IVDPDVIQQH LSTTVSEPDK IFYRRASENE SPLSVQNFKF KGLGATVINS NSYPARSLNI
TYKVFIESFK YSNSAFLEKN NSLVNRVQAE IAEDINSFLD NPEAGQVIVY IQDKQRLKEL
TEYLKKHRRN FQLFTDYLEI HANISEQEKE EIQKCNTDVK VVFMTASASR GLSFPKAKHI
LVDIPRFAIE QNLMEIIQVI YRGRGNYLED GMTKTLDNEE KDLILYLSER AVYYADDPEL
SLQESVLSLV NILLIFKTSV MTRISGSGQI GKDHFMMIPI GGKSVFAAGE TFTSKISGLI
KELKKEHIRR RSDKLLKEVY TSLEQLLGRV KIILSDLDNS PPTPTLSYLS MRESFADQFV
KLVSSGLDQL LSFGPVEASH ISGSMLVVSL ANKALQENYE MRLERELKPY ANNELLKKLY
SINSNQAYPE NLRSASFGAI ELVNLLGKQM RRTQWFEQNS QRFDQYYAIP LFIFTSNEAI
KDYFSRGVEE PDGESFRDIL AEYIRCMFPV DNILPISSQY GEFPFVVFRS YSLSEIRHKL
FTDKQLLTSN ELNILNLILA QED
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