Gene Ava_C0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0235 
Symbol 
ID3678034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp282584 
End bp285070 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content35% 
IMG OID637715315 
Producthypothetical protein 
Protein accessionYP_320509 
Protein GI75812892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.669224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000565491 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGAGAGC TAGGTGAAGA CAGCACAGGT TTTTTGTATC CCCCAGCAGC TATACAAATT 
AAAACCTTAC TCAAAGAACG TTACAAACAA GGTTTTCCCA TCATCAAAGA AATCATTCAA
AATGCGAATG ATGGTGGCGC TAAAAGGCTG GATATTGGAG TATCTAGTGG TTTTGACACT
GCAAGTCATC CTCTGCTGCA ATGTCCTGCC TTATTTTTTA TTAATGATGG TAGTTTTCGT
GATGAAGATG CTCAAGCAAT TCGCTACTTT GGAATAGATT TAAACGCTAA AGATTCCGCT
AAAATTGGAA AATTTGGACT TGGACAGAAA AGCATATTTC ACCTTTGTGA AGCTTTTTTT
TATATTGCTA GTTCAGAATT GCTTAGAGGT GATCCTTATC GGTTCCAATT TATTAATCCT
TGGGCAAATC CTACCGATCC AAAACAACCT AAATGGAAAC AACTAACAGT AAAAGATAAA
GAAATTGTAG AGAATTATTT GAGTAATCAA GCTTTACTAG GTAAACAGTA TTTCATTCTT
TGGATACCAT TACGACGAAA AGAAGCTGAT AATAATCGCT GTATTGTAGA TAACTATTAT
GATGAGCGTC TGATCGAAAA AGACTTTCCT AAGAATATGG GTGAGAAAAT TACTACATTA
TTACCTATGT TGCGATCGCT TCGAGAAGTT CACTATTGGC TACCTAATGA TGCAGGGCAA
TTGCAAGAAG AATTCCATGT TTATTTAGAT GCAAAAGCGG AATGCTGTTC TTATCCGAAG
TCCGAGAAGC CAGACCGGAA AGACATTCCG AAGATGCAAA GACCGCTATT TGGCTGTATT
TCTCTAAGAA ATCGAAATGC CCAAACCATT ATTACTAATT ATGCAGGTTG GGAGGCTATT
TTAGCAGCCA ATCAATTTCA TCAATTGTTA CCTTCTCCTC CCACAACACT AGATGACATC
AAAAAGTCCA CACATTGGCC AAAGCCATAT ACAAAAGATC AAGAAGGAAA TATAGAGAAT
CAACCCGATA AAGCAGTCCC CCATTGTGCA GTTGTCTTTT CTCGAACTCC GGTGCAAGGA
GAAGGAAGTT TAAACCTTCA ATGGGCGGTT TTCCTACCAC TTGTAGATGA ACAGTCAGAT
GTTACCGAAT TTCAAAATTG TAAATGTGAT GGTAATTGGA ACTATACGCT TCTGCTTCAT
GGTTATTTCT TTCCTGATTC TGGACGGCGT TATGTTGAGG TATTAAAGGA TATTTGCGAG
GATAGAATTT GTTGGAAACT TCCCGAAAAT GAGAACGACA TGATTAGACA GTGGAATGCT
ATTCTTGCTA CTGTTGGCAC TTTATATAAT CTTTTACCTG CTTTAAATAA ATTTTGTAGA
CGACATCAAC TTGAACGAGA GGATATTGCA AATCTTTGTG CTTCATTGAG AGAAACCAAA
ATATTTAAAT CCACAACTTG TCAAGAATAT ATTTATACTG ACGATTTCTG GGTTTATCAA
CTTCAGCCAG AACAATATGA CTGGCAGTTA GTGAAGAGAA CACAAAAGTT TTTGCCATTA
CCAAGCATCT CAGAGGAAAT ATGGTCAGCA TTTCCAGAAC TATGCAGATG TGCTAAAGAA
TATTGTCTTG TGTTGTCAGA TACCCCTAAT CTATTTACGT CTTGCAAGCC AGATAATTGG
GAGGAATCAG ACATTCAAGC AATACTAAAA TCTCTTAATC TAAAAAATGT ATTTGAGCAA
GTTGAATGTA TAGATTTTTT GGTTAACTTA CTGAAATTAT TTTCAAATTC TCTGACTGAG
AAAATACAGA ATTGCTTAAA GGCTGTTCTT CTAAAGGTAT TTATTAATTT AGAACTAATG
AGTCTTACAC ATTTGAAAGA CTCTCTAAAA AAAGTTATTA ATCTTATCGA TGAGTCAAAT
TGGTTTGAAC TCCCATGTAA TGATACACAA ATATTACGGA TTATCCAAAA TCAGGTTAAT
ATTTTGATTC TTCCAATGGA TTTTGCTCCA CAGCGAAAAA CAGAACCTAA AATTTCTGGA
CATGATGCAG GATTAATAGT TTCTTACTTG GTAAGACATT CAAAAACTGA TATTCAACAG
AACGAAACAC TTATTCTACA AATTATTAAA GCTATTCCTA AACAGGAAAT GGTTATATTT
CGAGAATATA CTAAAGACTT AAAATTTGTT TCTGTATTTA ACTGCCGCAG TAATATTTCT
GAGGTTTATA CTCCCTCAAA CCTTGTAAAT CTACAACAAC AAGGATTACT ATTTTTGAAT
TTATCGGACA GTAGAAAAAT TGCTGCTGCC CTACAAGCGG CCTTGAAAAA CAAGACAATT
ATTTTAGTTA ATAATACAAT TGCCAACAAT TTTCTAGAGG AAGAAATACG GGGGTGCAAT
CACTCTGCTT GTCTAAGTTT GATTAAACAA AAGCCAGAAC TATCTAATAT AGAAGATCGT
GCAAAATTAC TGGAGGAACT ACTCTAA
 
Protein sequence
MRELGEDSTG FLYPPAAIQI KTLLKERYKQ GFPIIKEIIQ NANDGGAKRL DIGVSSGFDT 
ASHPLLQCPA LFFINDGSFR DEDAQAIRYF GIDLNAKDSA KIGKFGLGQK SIFHLCEAFF
YIASSELLRG DPYRFQFINP WANPTDPKQP KWKQLTVKDK EIVENYLSNQ ALLGKQYFIL
WIPLRRKEAD NNRCIVDNYY DERLIEKDFP KNMGEKITTL LPMLRSLREV HYWLPNDAGQ
LQEEFHVYLD AKAECCSYPK SEKPDRKDIP KMQRPLFGCI SLRNRNAQTI ITNYAGWEAI
LAANQFHQLL PSPPTTLDDI KKSTHWPKPY TKDQEGNIEN QPDKAVPHCA VVFSRTPVQG
EGSLNLQWAV FLPLVDEQSD VTEFQNCKCD GNWNYTLLLH GYFFPDSGRR YVEVLKDICE
DRICWKLPEN ENDMIRQWNA ILATVGTLYN LLPALNKFCR RHQLEREDIA NLCASLRETK
IFKSTTCQEY IYTDDFWVYQ LQPEQYDWQL VKRTQKFLPL PSISEEIWSA FPELCRCAKE
YCLVLSDTPN LFTSCKPDNW EESDIQAILK SLNLKNVFEQ VECIDFLVNL LKLFSNSLTE
KIQNCLKAVL LKVFINLELM SLTHLKDSLK KVINLIDESN WFELPCNDTQ ILRIIQNQVN
ILILPMDFAP QRKTEPKISG HDAGLIVSYL VRHSKTDIQQ NETLILQIIK AIPKQEMVIF
REYTKDLKFV SVFNCRSNIS EVYTPSNLVN LQQQGLLFLN LSDSRKIAAA LQAALKNKTI
ILVNNTIANN FLEEEIRGCN HSACLSLIKQ KPELSNIEDR AKLLEELL