| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0231 |
|---|
| Symbol | |
|---|
| ID | 3678030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007412 |
|---|
| Strand | + |
|---|
| Start bp | 271841 |
|---|
| End bp | 272428 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637715311 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320505 |
|---|
| Protein GI | 75812888 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.627345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000310326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT ATGAAATGCT CAAGAGTTTA CCCAAAGAAA GGTTAGAAGC CAGACAATTT
CTACGCCACT GTTTCGGTAT TGCAGAACTC AGCCCCCCAG AACTTCTTGA AGAAGAAACA
GATTCGCAAT ACCGCAAAAA ATGTATCACT GTACTATGTG CAGTCTTAGG TGTACAAAGA
CCAACAGTTC GTAAGTGGGG AAGCGATCTC AACTTTGACG GAATACCCAA CTACTGCAAA
GTTTCACTTG CTTACATTCA CGCGGCCGAA ATCGTACCAA ACCAGCTAAA TAGCATCTTG
ACAGGAGAAT ACAATGCACC GGAAGTAGAC GCTCAAACCT TTCTTGAAAA AATACTCCTT
GAAGGGTTAA CTGAAAAACA AATACTGCAA ACCGTTTCTC ACGCCAATTT TCGCGCAACT
TGTGTCAAAA CCCTCACGCA AGTATTACAT ATTGGCACCA AATCAGTCCA AGATTGGGGT
CAAGATATGT CGTTTCACAA AATGCCCAAA ATTCACAAGC ATACCTTGAG CTATGCTTTG
GCTGCTATCT CCAAATCGTC ATCAAAAAAT TGGGAAAAAG CAGCCTGA
|
|---|
| Protein sequence | MKNYEMLKSL PKERLEARQF LRHCFGIAEL SPPELLEEET DSQYRKKCIT VLCAVLGVQR
PTVRKWGSDL NFDGIPNYCK VSLAYIHAAE IVPNQLNSIL TGEYNAPEVD AQTFLEKILL
EGLTEKQILQ TVSHANFRAT CVKTLTQVLH IGTKSVQDWG QDMSFHKMPK IHKHTLSYAL
AAISKSSSKN WEKAA
|
|---|
| |