Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0230 |
Symbol | |
ID | 3678029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | + |
Start bp | 270157 |
End bp | 271707 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637715310 |
Product | hypothetical protein |
Protein accession | YP_320504 |
Protein GI | 75812887 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.741061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000386668 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACACAAC TGCAAGGAGC GATCGTAGTT TTACCCGACA ACCAAGCGAT CGCCCAATTA GAATTAGAGC AATATATCGA AGAACAAGCC GATGCCATTG CTCCTTTTGC AATAACTTAC AGCTTCGATT ACAACCAATT TAAAAAACCT GAACTACAAA GCAAAGCCCG AACAACGTTG GGTAACTTCT TAGGGTTTGT TCGCCAGACC TTTGATGGTT TATTAGAAAG TGGTCGAGCT TTGCAGCATG TCTATGACGA CTGCATCGCT ATGGCCACTG ATGGGAAAAA GATTTTTGCA GCATGGCTCG ATAGCCCTGA CTTTGGGGCA TCACGCTACA TTGCTAAAGC CTCAATGGAA ATATACACTT GGTTTGAGAA GCTTCCGAAA AGGTTACAAC GCCTTGTGCG CGAGAAAGTA CAGAATTGGA GCGTTGCAGC CCTGCGTCAG TTAACTCAAA TCTCAACTGA CTTAGTGAAG GAGCTGGTAG GTACTGGGAA AAAGACAGTA GCACAAATTA AAGCGGCAGC AACCTCAAAA CTGCCTACTC CTAAAGCAAA TACTCTTTAT AACTCTAAGT CAGTTCTGGT TGTTAGGAAA TCAGATTCTA TCGCATTATC TAAGCCACAG TTTGCACCGG GAGTGCGGGT TATCGTGGTC GAGGACAATA TGGGTTGTAC TGGATGTAGG GGCATCATTA TTTCTAAATG GGATAAAACT GACTCAGATT TGTGGTGGGT ATTATTAGAC CATACAGTTT CTATGGGACT AGAAACTAAG CGCCTGTTTG AACCAGAACA GTTACAAGTA GAAGTGTCCA CTGCCGAAAT TACTCCCAAA CAGACAAAGC TTTACACAAC TGAAAAACTC TACACTGCGG CTCAACTAGA GCAGAAAATA GCAGAAGCCT TAGCACAACA AAATCAAGAA AAAGCCGAAG AAGAACTGGG GCGGTTTGTT GAAATTCGAG ATGCAGCACT AAAAGCAGCA ACTGTAGAAC TCCAAGCAGC AAGAGCATAT GCCCAAAAAA TGGCCCAAGC CAAGGAAGAA GTAGCTAAAA AGCTAATTGA AACAGAACGC GAACTAGGGA AAGTGCGGTC ACTCCAAACA GAAAAGGCAC AATTGGAACA ACGAGTAGCC CAATTAGAAA AAGCTCTCGA AGATGCTAAC AAAAACAGAT GGAGCAATAC ATTCAATAGC CAAGCTGCTA AAGTAGTGAA CTCGGAGTTG GAGAAAACTA TTACACCTTT AATGTCGGAA GTTGAGCATT TAAATAATGT ACTCTTATTA CGAGAAGAAG AACTAGCCAA ACTTCAAGTT TTTAATACCA AACAACAGGA AGAAATAACG CAATTACGCC AATTATTACC TTTGCCTAAC ATCGAAACCC AAGAATCAAC AATTATTGCT GAATTTGGGC ATATAGGAGA GCAGTTTGGT TGGGCTGGTT GGAGTCGTCA AGGTTATCTA GCAGTCAATG GAATTTTACA TACAGGGATA AATGCTATTG CGGCTTTTGT CTTTGATTTG ACTAATTCCC AACGTCATTA A
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Protein sequence | MTQLQGAIVV LPDNQAIAQL ELEQYIEEQA DAIAPFAITY SFDYNQFKKP ELQSKARTTL GNFLGFVRQT FDGLLESGRA LQHVYDDCIA MATDGKKIFA AWLDSPDFGA SRYIAKASME IYTWFEKLPK RLQRLVREKV QNWSVAALRQ LTQISTDLVK ELVGTGKKTV AQIKAAATSK LPTPKANTLY NSKSVLVVRK SDSIALSKPQ FAPGVRVIVV EDNMGCTGCR GIIISKWDKT DSDLWWVLLD HTVSMGLETK RLFEPEQLQV EVSTAEITPK QTKLYTTEKL YTAAQLEQKI AEALAQQNQE KAEEELGRFV EIRDAALKAA TVELQAARAY AQKMAQAKEE VAKKLIETER ELGKVRSLQT EKAQLEQRVA QLEKALEDAN KNRWSNTFNS QAAKVVNSEL EKTITPLMSE VEHLNNVLLL REEELAKLQV FNTKQQEEIT QLRQLLPLPN IETQESTIIA EFGHIGEQFG WAGWSRQGYL AVNGILHTGI NAIAAFVFDL TNSQRH
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