Gene Ava_C0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0224 
Symbol 
ID3678023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp261179 
End bp262237 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content42% 
IMG OID637715304 
ProductATPase 
Protein accessionYP_320498 
Protein GI75812881 
COG category[L] Replication, recombination and repair 
COG ID[COG3593] Predicted ATP-dependent endonuclease of the OLD family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0363611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC AATCCCTACA GCTAAAATAC TTTAAAAAAT TCCGGTCTTC TACATTTGAT 
TTCACAGATC CAGAAACTGG CTTGGCGCGA GATATTATTG TTCTCATCGG CATGAACGGT
GCTGGAAAAA CCAGTCTTTT ACAAGCGATC GCCGCAACTC TCGGCACAGC AACCGGACGC
TTAAAAGAAC CCTCCGATTT AGAATGGGCA GGATTTAACT ATGAACTGCT TGGGAGTAAC
TGGGGAGCAT TTGAGCCGGA GGTGACTGTA CAGGTGCAGT TCTCATCTAG TGAACTCGAA
GCTGTGCGGT ATTTTCAACA GAAATTACGA GAGATGGGTC GTGATTTGCA GCCTCCTGCT
GAAAAGCATA TTGTTAACCT TAAATGGCGA AATGGGCGTG TTCAAGCAGA TAGTGCTGCG
GAATTATTTC AATTTAAAGG ACGAGAATAC GCTAAACAAC TGCTCCGTGC TGAAGGATTT
TCAGCATTTG AACGAGTGGG TACAATTCTT TGGTACACAG AACAGAGAAC ATCAACTAGC
CTAACTACAG AAGACCCAGA ACGCAAACTA GAAATTACAG AAGACCTGTT GCGCGATCGC
CTTTCTAAGT GGCGACAATT CCATCAAGAT GTAGGAACAC CTAAAATCCC CAATCTACGC
CCAGGACAAA AGGATTTATA CGCCGAAATT GAACGCGCTT ACAAAGCAGT CTTTCCAGAA
CGCAGTTTTG AAGGCCCAGT TCTGCGAGAG AATGTAGACG ATATTTTAAG TGAACCCTGG
TTTTATTTAT ACGACGGTAA AAACCAGTAT GAAATTTCTG AGATGTCCGG CGGTGAACGG
GCTATTTTCC CAATGTTAAT GGACTTTGCT AGTTGGAATA TTCACAACTC TGTCATTCTG
ATTGATGAAA TTGAATTGCA CCTACATCCA CCAATGCAAC AGGCATTACT GAGAGCTTTA
CCCAAATTAG GCACAAATAA TCAGTTTATT ATTACAACCC ACTCTGATTA TGTAGAGCAA
TTAGTGCCTG AAGCATATAT TATCCGGCTA GAGGTGTAA
 
Protein sequence
MKIQSLQLKY FKKFRSSTFD FTDPETGLAR DIIVLIGMNG AGKTSLLQAI AATLGTATGR 
LKEPSDLEWA GFNYELLGSN WGAFEPEVTV QVQFSSSELE AVRYFQQKLR EMGRDLQPPA
EKHIVNLKWR NGRVQADSAA ELFQFKGREY AKQLLRAEGF SAFERVGTIL WYTEQRTSTS
LTTEDPERKL EITEDLLRDR LSKWRQFHQD VGTPKIPNLR PGQKDLYAEI ERAYKAVFPE
RSFEGPVLRE NVDDILSEPW FYLYDGKNQY EISEMSGGER AIFPMLMDFA SWNIHNSVIL
IDEIELHLHP PMQQALLRAL PKLGTNNQFI ITTHSDYVEQ LVPEAYIIRL EV