Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0208 |
Symbol | |
ID | 3678128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | + |
Start bp | 246328 |
End bp | 247473 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637715288 |
Product | hypothetical protein |
Protein accession | YP_320482 |
Protein GI | 75812865 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.415163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0047208 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTAAAA AATTTACTAT GAAAAATTGG AATAGGTGGA ATACAGAAGA AGAAAAACTT CTTACTAGAT TAGTTACAAA ATGCTCAAAT ATTGATGAAA TACATCAGGA ATATTTTCCA TATAGAAGTA GACAATCAGT AAAAGGAAAA CTGAGGTTAC TAGGATTAAC ACTTGAACCA CAATGGACTG TCGAGGAAGA AGAAATATTA CATGAACTTT ACTCTGAGCT ATCACCAAAG ATGATACAAT ATCAGTTCAT GCCTCATAGA ACTCTTCCCG CAATTCACGC TAAAGCACAA AGACTTAACC TAAAACAACG CCATAGATGG ACAAAAGATG AAATACGATA CCTCAAAGAT AACTATTTAA CTGAAACTTA TGAGGTCATA GGAAAAAAAT TAGGTAGAGA CGAAGCAGGG GTAAGAGCGA AAGCTCAAGC AATGAAATTA AGAAAACTTG AGTCGTACAC AGTTAATCAT AATTATTTTA GCACTCCAAA TTTAGAAAAT TGCTATTGGG CAGGATTTTT AGCAGCTGAT GGATGCATAA ATTATTCAAG TCATGGTTAT ATTTTAGAAG TTGGACTACA GGAACAAGAT TTAGAGCATT TAAGAATATT AAAGGATTTA CTTGAATGCG ATCGTCAAAT AGCCGAAATG CATAACTCTA ATCAAAAACA TCAATATCCA TTTGGGAAAA CCTACACGAA TGGTAAAGCC TTTAGATTGA GAATAAATAG TAAACAAATA TGTGATGATT TGATTGGCAG ATTTAATATT ACACCAAATA AATCTTTGAC TCTTAAACCT CCTGAGCTAG ATAATGAGCA ATTGATAAAA GCATTCATTA TCGGATTAAT AGATGGGGAT GGTGGCGTAA ACTTATTCAA AGTCAAAGGA AAAGTTAATA GCATAGAAAT AGACCTCACA GGAACAATAG AAGTACTCAA TTGGGTAAAA AACTGGTTTG ATATTTGGGT TTCCAATAAT CATTACAAAT GTGCTAAACC CAAACAAAGC ATGAATTCAA AAGCTTATCG ATATCATGTA GCAGGGAAAC GAGGAATAGA ATTATGGAAA ATACTATCCC AAGTTAATGT ACCTAAGTTA AAACGTAAAT GGCACAAACC TTTACCCTAT TTTTGA
|
Protein sequence | MTKKFTMKNW NRWNTEEEKL LTRLVTKCSN IDEIHQEYFP YRSRQSVKGK LRLLGLTLEP QWTVEEEEIL HELYSELSPK MIQYQFMPHR TLPAIHAKAQ RLNLKQRHRW TKDEIRYLKD NYLTETYEVI GKKLGRDEAG VRAKAQAMKL RKLESYTVNH NYFSTPNLEN CYWAGFLAAD GCINYSSHGY ILEVGLQEQD LEHLRILKDL LECDRQIAEM HNSNQKHQYP FGKTYTNGKA FRLRINSKQI CDDLIGRFNI TPNKSLTLKP PELDNEQLIK AFIIGLIDGD GGVNLFKVKG KVNSIEIDLT GTIEVLNWVK NWFDIWVSNN HYKCAKPKQS MNSKAYRYHV AGKRGIELWK ILSQVNVPKL KRKWHKPLPY F
|
| |