Gene Ava_C0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0198 
Symbol 
ID3677768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp234415 
End bp235356 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content38% 
IMG OID637715278 
Producthypothetical protein 
Protein accessionYP_320472 
Protein GI75812855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.202809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00402229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAAG TACGAGCTGA TTATGATGGT GCTTGGAAGG AAGGGGTAGA ACAATATTTT 
GAAGCGTTTC TTGCATTCTT CTTTCCAGAC ATTCAAGCAG AAATTGATTG GGGACGAGGC
TATAATTTTC TTGACCAAGA ATTGCAACAA TTGATAAGAG AATCTGAAAT TGGTAAACAA
TTCGTCGATA AGCTAATCAA AGTTTGGCTA AAAGATGGAA AGGAAACTTG GTTGCTTATT
CACCTGGAAA TCCAAAGTCA AGTAGATACC AACTTCCCTA AACGGATGTT TTCTTACCAC
TACAGAATCT TTGACCGTTA TAACCAAGAA GTTGTTAGCT TGGCAATTCT GGGGGATAAT
CAAGCCAACT GGCGGCCACA AGAGTATAGT TATGGTCGTT GGGGATGTCG CCTTAGTCTT
CAATTTTCCA TTGTCAAGCT ACTGGACTAT GAATCTCGTT GGTCAGAATT AGAACAAAGT
GATAGTCCTT TTGCCGTTCT GGTGATGGCG CACCTGCGAA CACAAGCGAC AACTCAAGAT
TTAGCAGGCC GATTGCAGTG GAAGTTGAGC CTAATTAAAC GAATGTATGA GTTAGGCTAT
AGTAGAGATA AAATCCAGCA AATCTTCCGG TTGCTAGATA GATTAATGAC TCTACCACCG
GAGTTAGACT TAAATTTCAA AGCCGAATTG GAGCGTTTTG AGGCTGAACA GCAAATGACA
TACATGACAA GCATAGAACG CATAGGTATA GCAGAAGCTA CCCAGAAATA TATTGCTCAA
ATCCTAACAA TTCGATTTAA AGATGTTTCT ACTGAATTAG TAGAAAAATT AAATAAATTA
TATGATATTG AGTTATTGAA TCAATTGTTA GAAAAAGCAG TAACTACAGG TTCAATATCT
GAGTTTGAGC AACAATTAAG TCAGGAAGAT ACAAATACAT AG
 
Protein sequence
MSEVRADYDG AWKEGVEQYF EAFLAFFFPD IQAEIDWGRG YNFLDQELQQ LIRESEIGKQ 
FVDKLIKVWL KDGKETWLLI HLEIQSQVDT NFPKRMFSYH YRIFDRYNQE VVSLAILGDN
QANWRPQEYS YGRWGCRLSL QFSIVKLLDY ESRWSELEQS DSPFAVLVMA HLRTQATTQD
LAGRLQWKLS LIKRMYELGY SRDKIQQIFR LLDRLMTLPP ELDLNFKAEL ERFEAEQQMT
YMTSIERIGI AEATQKYIAQ ILTIRFKDVS TELVEKLNKL YDIELLNQLL EKAVTTGSIS
EFEQQLSQED TNT