| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0194 |
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| Symbol | |
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| ID | 3677994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | + |
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| Start bp | 230888 |
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| End bp | 231676 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637715274 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_320468 |
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| Protein GI | 75812851 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00139406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACCTA TTAATGTTGT CATCATTGAA AATGAGAACA TATCTAGGGT TGGTGCGGCG
ACGATATTAT CTGAAACTGG TAAAATCCAG GTATGTGGCC TTGCAAAAAC CGGAAAACAA
GGAATAGAAC TTGTTGACCA ACAAAAGCCA GATATCGTGG TGATAAATAT TGATTTACCT
GATATCAATG GCACTGATGT CATAAGTTTA ATTAAATGCA AACACACGTC AATTAAAATA
GTGGTTATGA CTGCAAATAG CAGCCGAGAT ACCATTAACG CAGCAATAAG TAATGGCGCA
GACTGCTACT ACTGTAAAAA TAATGCCAGA GAAGAAGTAG GAGAAAGATT CATTGAAGCA
GTAATGGCTG CGTACAATAA CGAATCATGG ATTGACCCAA CTATTAATCG CATTCTGATT
GATAATCTTA GGTCAAATGA CACAGCCGAT AGAGATTCAC TAGATTTGTT AAGTGATTTC
TCTAATAAAG AAATTACAGT TCTCAAATTA GCGGCTGGTG GCATGAAAAA TAATGAAATT
GCTAATGTCA TGTATGTTTC CGAAGGTACA GTCAGGTCAT ATTTACATAA TTCATTTATC
AAATTAGGAG TCAAAGATAG ATTAAACGCT ATCCGTGAAG CTATCCGCCT GGGAATCCTC
AGCTTTGCAG ACATGAAAAT CGAAGAAGAA GTTACTCAAG CAACCCACAC AAGAGTCAAA
ACCAACCAAA ATAGTCAAAA AGATACAGCT AAAACGAGTA ATAAGGGATA CAAAGGCTGG
GTTGCCTAG
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| Protein sequence | MKPINVVIIE NENISRVGAA TILSETGKIQ VCGLAKTGKQ GIELVDQQKP DIVVINIDLP
DINGTDVISL IKCKHTSIKI VVMTANSSRD TINAAISNGA DCYYCKNNAR EEVGERFIEA
VMAAYNNESW IDPTINRILI DNLRSNDTAD RDSLDLLSDF SNKEITVLKL AAGGMKNNEI
ANVMYVSEGT VRSYLHNSFI KLGVKDRLNA IREAIRLGIL SFADMKIEEE VTQATHTRVK
TNQNSQKDTA KTSNKGYKGW VA
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