Gene Ava_C0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0176 
Symbol 
ID3678155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp204389 
End bp204832 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content39% 
IMG OID637715257 
Producthypothetical protein 
Protein accessionYP_320451 
Protein GI75812834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00360651 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.30416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTA ATAAATCTAC TAAAGCTCAA GCTGCTACAG TCGATGATTC AACAATGGAG 
CAATTCAAGA TTGAATCATT CGACGTGCGT AAATACAACA CAATTTTCTA TTCAATCCGT
GACCTTTACG GACGCGAATC ACAACGGCAA CTGGGGTCTG ACAATTTCGA TTGGAAAGCT
TTTAAGCTTC AGTTTGAAAT TTGTTTTGGT CGTCCTGAAG ATTGTCGTTA CACCACAGAA
CAATTATTGA ATTTCGCCAA ATACAAATTC AACATGAGTT TGGAAGACTT GTTAGCTTAT
AACCGTAAAT CATGGGAACT CCGCAAAAGA CGAGAACCAC AATATGCAGA CATGGAGCAA
ATTAACTCTG TAATTCAGCA CATTCCAGAA ATTACCAATT CTCACGTTGA TTGCTCCCAA
ATGCTAGAGC AACAGCCATA CTAA
 
Protein sequence
MAANKSTKAQ AATVDDSTME QFKIESFDVR KYNTIFYSIR DLYGRESQRQ LGSDNFDWKA 
FKLQFEICFG RPEDCRYTTE QLLNFAKYKF NMSLEDLLAY NRKSWELRKR REPQYADMEQ
INSVIQHIPE ITNSHVDCSQ MLEQQPY