Gene Ava_C0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0171 
Symbol 
ID3678150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp200241 
End bp201014 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content36% 
IMG OID637715252 
Producthypothetical protein 
Protein accessionYP_320446 
Protein GI75812829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.353474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.731935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAT CATTCTACCA AAACTTTTTA GAAAAATACC TGAATAAAGC ACAGTTAATC 
ACCCTGAAGA TGTTGGTGTG GTTGTTACAA AATCAGAAAC AGGTGAGGAT AGAAAGACTG
GCCGCAACGT TACCATTACC AATACAGCAA AATAGTCGGA GACGACATTT ACAAAGATTT
TTAACACTAA ATGCCTTGAG TGTAGTGTTA CTATGGTTTC CCATAATTGA AGCAATAATT
AACCAACATT TCAAAGTAGG ATCACAGTTA ACCATTGCAA TGGATAGAAC ACAGTGGAAA
GAAAATAATG TGTTGATGGT TAGCGTAATT TACCAAAAAA GAGCTTGGCC AATATATTGG
TGTTTGTTAG AGAAAGATGG TTGCAGTAAC CTTACTGAAC AGCAAAAAGT ATTACGCCCA
GTAATTCGGT TATTAAAAAA ATACAAATTA GTCATTATTG GGGATAGAGA ATTTCATAGC
ATTGAACTGG GGAGTTGGCT ACACAAGCAG AATATAGGTT TTGTACTCCG TCAAAAGAAG
GATACAACTT TCTGCCAAAA ATGGCAAAAA TTTCAGCCTT TAAGTAACAT TGAGATTTAT
CCTGGTGTCC GGCAATTTTA CACCAACGTC AAGGTTACTC AAAAACGTGG CTTTGGTCGG
TTTAATTTAG GAGTCTACTG GAAAAGAAAG TACAGGGGTA AACAAGAAAA AGATGCTTGG
CATTTATTAA CTAATTTACC TGACTTAAAC ACTGCCCTCA AAATATATGC TTAA
 
Protein sequence
MLASFYQNFL EKYLNKAQLI TLKMLVWLLQ NQKQVRIERL AATLPLPIQQ NSRRRHLQRF 
LTLNALSVVL LWFPIIEAII NQHFKVGSQL TIAMDRTQWK ENNVLMVSVI YQKRAWPIYW
CLLEKDGCSN LTEQQKVLRP VIRLLKKYKL VIIGDREFHS IELGSWLHKQ NIGFVLRQKK
DTTFCQKWQK FQPLSNIEIY PGVRQFYTNV KVTQKRGFGR FNLGVYWKRK YRGKQEKDAW
HLLTNLPDLN TALKIYA