Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0171 |
Symbol | |
ID | 3678150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 200241 |
End bp | 201014 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637715252 |
Product | hypothetical protein |
Protein accession | YP_320446 |
Protein GI | 75812829 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.353474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.731935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCAT CATTCTACCA AAACTTTTTA GAAAAATACC TGAATAAAGC ACAGTTAATC ACCCTGAAGA TGTTGGTGTG GTTGTTACAA AATCAGAAAC AGGTGAGGAT AGAAAGACTG GCCGCAACGT TACCATTACC AATACAGCAA AATAGTCGGA GACGACATTT ACAAAGATTT TTAACACTAA ATGCCTTGAG TGTAGTGTTA CTATGGTTTC CCATAATTGA AGCAATAATT AACCAACATT TCAAAGTAGG ATCACAGTTA ACCATTGCAA TGGATAGAAC ACAGTGGAAA GAAAATAATG TGTTGATGGT TAGCGTAATT TACCAAAAAA GAGCTTGGCC AATATATTGG TGTTTGTTAG AGAAAGATGG TTGCAGTAAC CTTACTGAAC AGCAAAAAGT ATTACGCCCA GTAATTCGGT TATTAAAAAA ATACAAATTA GTCATTATTG GGGATAGAGA ATTTCATAGC ATTGAACTGG GGAGTTGGCT ACACAAGCAG AATATAGGTT TTGTACTCCG TCAAAAGAAG GATACAACTT TCTGCCAAAA ATGGCAAAAA TTTCAGCCTT TAAGTAACAT TGAGATTTAT CCTGGTGTCC GGCAATTTTA CACCAACGTC AAGGTTACTC AAAAACGTGG CTTTGGTCGG TTTAATTTAG GAGTCTACTG GAAAAGAAAG TACAGGGGTA AACAAGAAAA AGATGCTTGG CATTTATTAA CTAATTTACC TGACTTAAAC ACTGCCCTCA AAATATATGC TTAA
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Protein sequence | MLASFYQNFL EKYLNKAQLI TLKMLVWLLQ NQKQVRIERL AATLPLPIQQ NSRRRHLQRF LTLNALSVVL LWFPIIEAII NQHFKVGSQL TIAMDRTQWK ENNVLMVSVI YQKRAWPIYW CLLEKDGCSN LTEQQKVLRP VIRLLKKYKL VIIGDREFHS IELGSWLHKQ NIGFVLRQKK DTTFCQKWQK FQPLSNIEIY PGVRQFYTNV KVTQKRGFGR FNLGVYWKRK YRGKQEKDAW HLLTNLPDLN TALKIYA
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