Gene Ava_C0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0170 
Symbol 
ID3678149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp199872 
End bp200222 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content36% 
IMG OID637715251 
Productputative transposase 
Protein accessionYP_320445 
Protein GI75812828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.444887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.693205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAG ATTGTAAAAC AGGTGGGTAC AATCTAGAAT CTTCTCAAGC CAGTCCCGAT 
AGACTTGTAC GAATAATATT CTTAATTGCT TTAGCAATGA CCAGTGCTTG GCTACAAGGT
CAAAAAATTA AATTACAACG ACAACAATCT TATGTCTGTC GTTCCCAAGA GCAGGGTAAA
ACTGAAAAAA GGCATAGTAA TTTTTGGATA GGTTTATATG GTTTTAATTG GATAGTTGCT
TGGTATGGGT GTCAAACATG GGTCGAGGAA ATGGTCAGTT CCATTCGCAA TAAGCAAGCA
TATTATCAAC GAGGTTTAAG AGCTATGAAG CTTATACAGC AAGCACTTTA A
 
Protein sequence
MFKDCKTGGY NLESSQASPD RLVRIIFLIA LAMTSAWLQG QKIKLQRQQS YVCRSQEQGK 
TEKRHSNFWI GLYGFNWIVA WYGCQTWVEE MVSSIRNKQA YYQRGLRAMK LIQQAL