Gene Ava_C0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0167 
Symbol 
ID3678146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp197867 
End bp198376 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content47% 
IMG OID637715248 
Productcyclase/dehydrase 
Protein accessionYP_320442 
Protein GI75812825 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.22431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGG TCATGAACCA ACGGGTCAAA GTTGAAAAGA CTTTAACCAT TAACAAACCA 
GTAGAGGAAC TTTATCGCTT TTGGCGTAAC TTTGATAACT TGCCACGCTT CATCAAGCAT
CTCAAACAGG TGAGGGTACA CGACGAAAAG CGATCGCACT GGATTAGCAA AGGATTCTTA
AATGAAAGCG TTGAGTGGGA TGTAGTCATT ACCGAAGACC GAGAAAACGA ATTGATTGCC
TGGACTTCGG TTGAAGGCGC AGCAATTGAA ACCTCTGGTC GCGTCCACTT CAAGCCAGCA
CCTGGGAATC GTGGTACTGA GGTAAAAACA GTCCGAGAAT TTACCCCGCC TGCGGGTGAA
ATTGGGGCTG CGTTGGCGAA GCCCGTCATA GACATCGCTA AATTATTTGG CGAAGACCCA
GAACTGCAAA TTAAAGAAGA TTTACGCGGC TTCAGAATGC TGATGGAAGC AGGCGAGATT
GCCACAACAG AAGGTCAACC GCGAGGTTAA
 
Protein sequence
MSTVMNQRVK VEKTLTINKP VEELYRFWRN FDNLPRFIKH LKQVRVHDEK RSHWISKGFL 
NESVEWDVVI TEDRENELIA WTSVEGAAIE TSGRVHFKPA PGNRGTEVKT VREFTPPAGE
IGAALAKPVI DIAKLFGEDP ELQIKEDLRG FRMLMEAGEI ATTEGQPRG