Gene Ava_C0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0165 
Symbol 
ID3678144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp196233 
End bp197402 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content46% 
IMG OID637715246 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_320440 
Protein GI75812823 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG TTTGCTGGAA CGGTGCCAAC GATGTACGGG TGGAAACAGT ACCCGATCCA 
AAAATCATTA ATCCGCGTGA TGCTGTTATT AAAATCACGA CAACAGCAAT TTGCGGTTCT
GATTTACACC TTTATAACGG CTACGTCCCC ACAATGGAAA AGGGCGATAT CCTGGGTCAT
GAAATGATGG GGGAAGTCGT TGAAATAGGC AGTGCCGTCA AAAATTTAAA TATAGGCGAT
CGCGTGGTTG TACCATTCCC TATCGCCTGT GGTAACTGCT GGTACTGTCA ACATGACTTC
TGGTCATTGT GCGATAATTC TAACCCAAAC GCTTGGTTAG CAGAAAAATT CATGGGTTAT
TCACCCTCTG GTATTTTTGG CTACTCTCAT ATGCTAGGTG GCTACGCTGG TGGTCAAGCT
GAATATGCCC GTGTTCCCTT TGCCGATACT GGTTTGTTTA AGATTCCTGA TGGACTAACA
GACGAACAAG TAGTGTTTCT AACAGATATC TTCCCCACCG GATATATGGC GGCAGATAAC
TGTAATATTC AGCCCGGTGA TATTGTCGCA GTCTGGGGGT GTGGCCCAGT CGCACAATTC
ACAATAAGAA GTGCTTATCT ACTTGGTGCT GAACGAGTCA TCGCTATCGA TCGAATTCCC
GAACGCCTAC AGATGGCTAA AGATCAAGGC AAGGCAGAAA TCCTTAACTA TGAGGAAGTA
AATGTTAGTG AAGCCCTCAA AGAAATGACA GGTGGACGCG GCCCAGATGC TTGTATTGAT
GCTGTGGGGT TGGAAGCACA CGGCACGGGT CTAGAAGGAG TATACGACGA AGTCAAGCAA
GCAGTGCGTC TGGAAACAGA CCGCCCCCAT GTGCTGCGGC AAGTGATGAT GGACTGTCGC
AAAGGCGGTC ACGTGTCAAT TCCTGGTGTT TATGTCGGCG TTGTAGACAA AATACCTATG
GGTGCTGCCA TGAACAAAGC CTTAGTATTC AAAATGGGAC AAACGCACGT TCATAAGTAC
TTAAACACAT TACTCGATCA CATTCAAAAT GGCAGGATCG ATCCATCATT CGTGATCACC
CATCGTCTAC CGTTAGATGA AGCACCCCGA GGTTACGGAA TTTTCAAAGA CAAGAAGGAA
AACTGTATCA AAGTTGTACT CAAACCATAA
 
Protein sequence
MKAVCWNGAN DVRVETVPDP KIINPRDAVI KITTTAICGS DLHLYNGYVP TMEKGDILGH 
EMMGEVVEIG SAVKNLNIGD RVVVPFPIAC GNCWYCQHDF WSLCDNSNPN AWLAEKFMGY
SPSGIFGYSH MLGGYAGGQA EYARVPFADT GLFKIPDGLT DEQVVFLTDI FPTGYMAADN
CNIQPGDIVA VWGCGPVAQF TIRSAYLLGA ERVIAIDRIP ERLQMAKDQG KAEILNYEEV
NVSEALKEMT GGRGPDACID AVGLEAHGTG LEGVYDEVKQ AVRLETDRPH VLRQVMMDCR
KGGHVSIPGV YVGVVDKIPM GAAMNKALVF KMGQTHVHKY LNTLLDHIQN GRIDPSFVIT
HRLPLDEAPR GYGIFKDKKE NCIKVVLKP