Gene Ava_C0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0161 
Symbol 
ID3678019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp190181 
End bp191278 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content40% 
IMG OID637715242 
Productglycosyl transferase, group 1 
Protein accessionYP_320436 
Protein GI75812819 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTG CTCAAATTGC TCCTCTTTGG GAGAGAGTTC CACCTCTTGG TTATGGTGGA 
ACAGAATTAG TCGTGGGCTT ATTGACCGAT GAATTAGTTC GGCGAGGGCA TGAAGTAACG
CTATTTGCAT CGGGAGATTC AATAACTTTG GCAAAGCTGC AATCAGTTCA TCCTTATGCT
TTGAGACTAG ATTCAAGCAT CAAAGAGTGT AACATCTATG AAATGTTGGA ACTGGCTTTG
GTATATGAGC AAGCCCAAAC CTTTGACATA ATTCATTCAC ATATGGGCTG GAGTGCGTTG
CCCTATGCAA ATTTAGTAAA GACACCGACA GTTACCACAT TACATGGTAT CTTTACCCCT
GATAACGAAA AGATGTTTCA ATATGCCAAA AAGCAGCCCT ATGTAAGTAT TTCCAATTCC
CAACGTGAAT CTAGGCTAGG GTTGAATTAT GTAGCAACTG TCTACAATGG CATTGATATC
AGTAGTCATA AGTTTCATCC TCAGCCGGAC GAACCACCTT ATCTGGCTTT TTTGGGAAGA
ATTTCACCAG AAAAAGGAAC AGACTTAGCA ATACAGATTG CAAAAGAGGC TGGTTGGCGT
TTAAAGATGG CAGCTAAGGT GGATGTCGTT GATATAGAGT ATTTTGAGCG AGAAATTCAG
CCCTTAATTG ATGGTCAGCA AATTCAGTAT TTGGGTGAAG CTAACCATGT TCAAAAGAAT
GCTTTGATGG GGGGTGCAGT AGCAACTTTA TTTACGATTA CTTGGCGAGA ACCCTTTGGT
TTGGTAATGA CAGAATCAAT GGCAGCAGGA ACACCAGTCA TCGCCATGAA TTTAGGTTCA
GTTCCTGAAG TAATTGTTCA CGGAAAAACT GGCTTTATTT GTAATAGTAT TTCTGAATGT
GTTAATGCCG TTAACAAAGT GGCAGAACTA GATCGTCATG CTTGTCGTCA ACATGTGGAG
AATTGTTTTA ACGTACAAAA AATGGTAGAT AGCTATGAAG AAGTTTATTG GCAGATTCTG
GCAGAGCGCA TGACTCAAAA TAAAAAAGTT ATGCATTTCG GCGATTTTAA ACATAAACAT
CAAATCCAGA AATGTTGA
 
Protein sequence
MRIAQIAPLW ERVPPLGYGG TELVVGLLTD ELVRRGHEVT LFASGDSITL AKLQSVHPYA 
LRLDSSIKEC NIYEMLELAL VYEQAQTFDI IHSHMGWSAL PYANLVKTPT VTTLHGIFTP
DNEKMFQYAK KQPYVSISNS QRESRLGLNY VATVYNGIDI SSHKFHPQPD EPPYLAFLGR
ISPEKGTDLA IQIAKEAGWR LKMAAKVDVV DIEYFEREIQ PLIDGQQIQY LGEANHVQKN
ALMGGAVATL FTITWREPFG LVMTESMAAG TPVIAMNLGS VPEVIVHGKT GFICNSISEC
VNAVNKVAEL DRHACRQHVE NCFNVQKMVD SYEEVYWQIL AERMTQNKKV MHFGDFKHKH
QIQKC