| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0143 |
|---|
| Symbol | |
|---|
| ID | 3678079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007412 |
|---|
| Strand | - |
|---|
| Start bp | 172352 |
|---|
| End bp | 172822 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637715226 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_320420 |
|---|
| Protein GI | 75812803 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCG TTCGTTGGGA ACCTTTCCGA GAAGTTGAAA GTTTGCAGCG GCAGTTAAAC
CGCTTGTTTG ATGAGATAGC ACCGACAGGT CGTAGAGAAG AGGAAGGCAT TGCCTTTATT
CCCTCCGCAG AGATTCAAGA AACCCCCGAT GCGGTTCATC TCAAGGTAGA AATTCCCGGT
GTAGACCCCA AAGACCTAGA TGTGCAGGTA TCGCCAGAGG CAGTATCTAT TTCCGGTGAG
CGCAAGTCAG AAATCAAAAC GGAAGAAAGA GGCATCACCC GCACCGAATT CCGCTATGGC
AGGTTTCAGC GCGTGATTCC GTTGCCTACC CGTGTCCAGC ACGATCAGGT GCAAGCAGAA
TACAAAGATG GCATTCTCAA GCTGAGGCTG CCCAAGGCTG AAGAAGATAG GAACAAGGTT
GTGAAAGTAA ACTTAGGTGA CGGGCACAGG GGCAACGGGC AAGGGCAGTG A
|
|---|
| Protein sequence | MALVRWEPFR EVESLQRQLN RLFDEIAPTG RREEEGIAFI PSAEIQETPD AVHLKVEIPG
VDPKDLDVQV SPEAVSISGE RKSEIKTEER GITRTEFRYG RFQRVIPLPT RVQHDQVQAE
YKDGILKLRL PKAEEDRNKV VKVNLGDGHR GNGQGQ
|
|---|
| |