Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0139 |
Symbol | |
ID | 3678075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 167919 |
End bp | 168590 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637715222 |
Product | transport-associated protein |
Protein accession | YP_320416 |
Protein GI | 75812799 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTG CAACCGCAAC CCGAACTGAC GAGGAAATCC AAAAGGATGT GCTGAATGAG TTGAAGTGGG ATCCCCGCGT CCAGTCTACC GAAATCGGCG TGGCCGTCAA AAACGGTGTT GTTACGCTCA CAGGCTGGGT CGATTCCTTT TACAAGCGCT GGGCTGCCGA AGAAGCTGCC CACCGCGTCC GTGGCGTACT GGCTGTGGCC AACGACATCG AGGTTCGGCT GCCGGTCTCT GCCGAGCGCA CTGACGCCGA CATTGCCGCA GCCGCCATTC ATGCGCTGGA GTGGGATGCC GGCGTGTCCA TCGATAATCT CGACGTCACG GTCTCCAAGG GCTGGGTCAC GCTCAGGGGT GTGGTCGAGT GGGAGTACCA GAAGCGCGAT GCCGAGCGGG TTGTCCGCCG CCTGAAAGGC GTCAAGGGGG TGACCAACTT GCTCACCATC AAGCCCCGCG TGTCGCCGTC GGAACTCAAG CAGAAAATTG AGCAGGCGCT GGTGCGCAGC GCGGAGACCG ACGCGCTGCG GATCACGGTC GAGGTGGAGG GGAGCAAGGT CATCCTGAGG GGGGCGGTGC GCTCCTGGGC TGAGAAGCAA GAGGCGGAGC GGGCAGCGTG GTCGGCACCA GGAATCACCT CAGTGGAAAA CCGGATCACG ATCTCGCCCT AA
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Protein sequence | MTTATATRTD EEIQKDVLNE LKWDPRVQST EIGVAVKNGV VTLTGWVDSF YKRWAAEEAA HRVRGVLAVA NDIEVRLPVS AERTDADIAA AAIHALEWDA GVSIDNLDVT VSKGWVTLRG VVEWEYQKRD AERVVRRLKG VKGVTNLLTI KPRVSPSELK QKIEQALVRS AETDALRITV EVEGSKVILR GAVRSWAEKQ EAERAAWSAP GITSVENRIT ISP
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