Gene Ava_C0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0138 
Symbol 
ID3678074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp166930 
End bp167769 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content62% 
IMG OID637715221 
Productaldo/keto reductase 
Protein accessionYP_320415 
Protein GI75812798 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC GTCGGTTTGG TTCCACAAAG CGTGAGGTCG CGGTGATCGG TCAAGGGACT 
TGGTACATCG ATCGCTGCGA TCGCGCCTCC GCAATCGCCA CGCTGCGTCG AGGTCTCGAT
CTCGGCATGA CCCATATTGA TACCGCCGAG ATGTACGGCA TCGCCGAGGA AGTGGTCGCC
GAGGCGATCT TCGGGCGACG CGATGAGGTC TTCCTGGTCT CCAAGGTACT TACCGAGAAT
GCCTCTCGGC GCGGGACGAT GGCGGCTTGC GAGAAGTCGC TTGCTCGCCT CAAAACTGAT
CGACTGGACT GCTACCTCTT GCACTGGCGC AGTCAGCACC CGTTGGAGGA CACAATTGCC
GCCTTCGAGC AGCTTCAGCA CGAGGGGAAG ATTCTCTCCT GGGGAGTGAG CAACTTCGAT
CTGCCCGACC TTGAAGAGGC CCGGGCGATC GCCGGCGAGG GTCGTTTCGT CTGCAACCAG
GTTCTTTACC ATTTGAAAGA GCGCGCGATC GAGCATGCCG TGATTCCTTG GTGTGAGAAG
CATAGCGTCG CCGTGGTCGC CTACAGCCCG TTCGGTCACG GGCACTTCCC AGATCCGCAC
ACGACCGGAG GCCGCGTGCT ACAGGAAATC GCCGCCGCGC ACAACGCGAC CCCTCGCCAG
GTTGCGCTTC GGTTCCTAGT GCGGCGGCCC TCGCTCTTCG CAATCCCCAA GGCCTCTAGC
CCCGATCACG CAGCCGAAAA CGCCGGGGCT GGGGAGCTCC AGTTGACCGA AGCCGAGCTT
GATCGGATCG ATAAAGCTTT CCCGCCCGGT CCCCGTCCCC ACGTGCTTCC AATGCTGTAG
 
Protein sequence
MEQRRFGSTK REVAVIGQGT WYIDRCDRAS AIATLRRGLD LGMTHIDTAE MYGIAEEVVA 
EAIFGRRDEV FLVSKVLTEN ASRRGTMAAC EKSLARLKTD RLDCYLLHWR SQHPLEDTIA
AFEQLQHEGK ILSWGVSNFD LPDLEEARAI AGEGRFVCNQ VLYHLKERAI EHAVIPWCEK
HSVAVVAYSP FGHGHFPDPH TTGGRVLQEI AAAHNATPRQ VALRFLVRRP SLFAIPKASS
PDHAAENAGA GELQLTEAEL DRIDKAFPPG PRPHVLPML