Gene Ava_C0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0134 
Symbol 
ID3678070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp163307 
End bp164314 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content49% 
IMG OID637715217 
Productheat shock protein DnaJ-like 
Protein accessionYP_320411 
Protein GI75812794 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCAG CAACCGATTT CAAAGATTAT TACGAAATTC TGGGTGTCAG TAAGAACGCC 
ACTCCGGAGG ATATCAAAAA AGCCTACCGG AAATTGGCAC GGAAATATCA CCCGGACTTA
AATCCTAAGG ATAAGCAAGC CGAAGCGCGG TTCAAAGAAA TTAACGAAGC TAATGAAGTG
CTGTCTGACC CAGAAAAACG CCAGAAGTAT GACCAGTATG GTCAGTACTG GCAACAGGCT
GCGGCGGGTA CACCTCCACC CAGAGGGGCG GGTACACAAG GTTATGATTT TAGCCAGTAT
GGCAACTTTA ATGATTTCAT TGATGAATTG CTGGGAGGGT TAGGTCGCAG TGGCGGTCGT
ACAAGGCAGC GCACAGCTAA TTATCGCACT ACAACAAGAC CAGAAGGATT CCGGGAATAC
GCCGACTTTG GCTATGGAGA AGACCCCTTC GGCCGCTTCA CTGAAGTTCC CGCACAGGAT
ACGGAAGCAG CGATCGCTCT CACTTTTTCT GAAGCATTTC ACGGTACACA GAAGCAGCTA
CAAATTGATG GAGAAACTAT CACTGTTCGC ATTCCGCCAG GAGTAAAATC GGGAAGCCGC
ATTCGAGTCA AAGGCAAAGG ACAGATGAGT CCTTTTATTC AGCAACGCGG CGATTTGTAT
CTGACAATTG AATTATTGCC CCATCCTTTC TTCAAATTTG AGGGCGACAA TCTTGCTTGC
GAAGTACCTG TCAGCCCAGA GGAAGCTGTA CTTGGCGCAC AAATAGATGT TCCTACGCCC
GATGGCAAGG TAACGATGAC GATTCCGGCC GGTGTGGATT CCGGTCAAGC ACTCCGACTA
CGTGGCAAGG GCTGGCGCGA TCCAAAAGGT AATCGTACCG CTTTGATCGT GCGGTTAAAA
ATTGTGACTC CCAAAGATTT GAGTCCCCAA GAAAGAGAGT GCTATGAAAA ATTGCGGCAG
GTCAGTAGTT TTAATTCCCG TCAAGGCTTA ACGGAGGTGC GGTTATGA
 
Protein sequence
MVAATDFKDY YEILGVSKNA TPEDIKKAYR KLARKYHPDL NPKDKQAEAR FKEINEANEV 
LSDPEKRQKY DQYGQYWQQA AAGTPPPRGA GTQGYDFSQY GNFNDFIDEL LGGLGRSGGR
TRQRTANYRT TTRPEGFREY ADFGYGEDPF GRFTEVPAQD TEAAIALTFS EAFHGTQKQL
QIDGETITVR IPPGVKSGSR IRVKGKGQMS PFIQQRGDLY LTIELLPHPF FKFEGDNLAC
EVPVSPEEAV LGAQIDVPTP DGKVTMTIPA GVDSGQALRL RGKGWRDPKG NRTALIVRLK
IVTPKDLSPQ ERECYEKLRQ VSSFNSRQGL TEVRL