Gene Ava_C0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0125 
Symbol 
ID3678061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp153011 
End bp154171 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content45% 
IMG OID637715208 
Producthypothetical protein 
Protein accessionYP_320402 
Protein GI75812785 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.1278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGT TACAGCATAT CCTGCAAGCA TTTGTACATA CCCAAAAGTC AGCACAGCGT 
AGTGCTTTAG CAATGGTAGT ACAAACAAGT GGCTCGGTTT ATCGCCGACC AGGGGCGAGG
ATGTTACTGG TTGAAGATGG ACAAATGATT AATGCGATTA GCGGTGGCTG TTTGGAAGGT
GATGTTTTTG AACGGGCGCA ATCGCTGATG TTTGGCGGTG GTGAACCGAT AGTAGTAAGA
TATGACACTA CATCGGATGA AGACATTGTA TTTGGCTTTG GGTTGGGGTG TAATGGCGTT
GTCGATGTTT TGATTGAATC TTTAGGTGAT GAAACTGCTG CCAGCCAAAT GTCTTTCATT
CAAGATTGTT TGCAGTCTGG GCAAGTGGGA GCGATCGCTA CTGTCTTTAA AATAGAGGGA
GCGTCAGATA TTACAGTTGG TTCTCGAATG ATGCTGAAAT CAGATGGCAC TGTCATCAAT
CACGTTGCTA ATATTTTCAT TGCTCAAAAG ATAGAAATAG ACACTCACCA AGCACTGAGA
AAAAAACAAA CTTGCGTACA ATCATATACT TTACCTCAAG GACGCGTTGA TGTGTTGATT
GAAGTAATTC ATCCATTAGT ACCACTGCTC GTATTTGGTT CTGGATATGA TACGATTCCC
GTGGTGCATT TGGCGAAACA TCTGGGTTGG CACGTTACCG TAATTGACGA TCGACCAGGG
TATTTGAGGG GCGATCGCTT TCCTCAAGTT GACCAAATTC TCTGGTGCGA ACTCAATGAT
TCCCACTCAT ACAAACATTT GCTGACACCG CAAACTGTAG CAGTTGTCAT GACACACCGC
TATCTAAGCG ACCTAGCATT TCTCAAGACT CTGATTCCGT CCCAGGTGCG TTACCTGGGA
GTGTTAGGCC CAAAACGCCG GATGCAAAAA TTGTGGGATG ATCTGTCTGA AGAAAATATC
ATTACCACAT CTGCACAAGA ACAACGAATT TATAACCCTG TAGGACTAGA CATTGCTGCG
GAAACACCCC AAGAAATCGC CCTGTCCATC GTGGCAGAAA TTCAAGCTGT AATTGGCGGA
GGTAGGGGTA GTTTCTTGCG CGATCGCCCA GGCTCGATCC ACTCTCTCTT AGAGCAACCA
TGTCTAACAT TGGCATTATA A
 
Protein sequence
MNELQHILQA FVHTQKSAQR SALAMVVQTS GSVYRRPGAR MLLVEDGQMI NAISGGCLEG 
DVFERAQSLM FGGGEPIVVR YDTTSDEDIV FGFGLGCNGV VDVLIESLGD ETAASQMSFI
QDCLQSGQVG AIATVFKIEG ASDITVGSRM MLKSDGTVIN HVANIFIAQK IEIDTHQALR
KKQTCVQSYT LPQGRVDVLI EVIHPLVPLL VFGSGYDTIP VVHLAKHLGW HVTVIDDRPG
YLRGDRFPQV DQILWCELND SHSYKHLLTP QTVAVVMTHR YLSDLAFLKT LIPSQVRYLG
VLGPKRRMQK LWDDLSEENI ITTSAQEQRI YNPVGLDIAA ETPQEIALSI VAEIQAVIGG
GRGSFLRDRP GSIHSLLEQP CLTLAL