Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0125 |
Symbol | |
ID | 3678061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 153011 |
End bp | 154171 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715208 |
Product | hypothetical protein |
Protein accession | YP_320402 |
Protein GI | 75812785 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.1278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGT TACAGCATAT CCTGCAAGCA TTTGTACATA CCCAAAAGTC AGCACAGCGT AGTGCTTTAG CAATGGTAGT ACAAACAAGT GGCTCGGTTT ATCGCCGACC AGGGGCGAGG ATGTTACTGG TTGAAGATGG ACAAATGATT AATGCGATTA GCGGTGGCTG TTTGGAAGGT GATGTTTTTG AACGGGCGCA ATCGCTGATG TTTGGCGGTG GTGAACCGAT AGTAGTAAGA TATGACACTA CATCGGATGA AGACATTGTA TTTGGCTTTG GGTTGGGGTG TAATGGCGTT GTCGATGTTT TGATTGAATC TTTAGGTGAT GAAACTGCTG CCAGCCAAAT GTCTTTCATT CAAGATTGTT TGCAGTCTGG GCAAGTGGGA GCGATCGCTA CTGTCTTTAA AATAGAGGGA GCGTCAGATA TTACAGTTGG TTCTCGAATG ATGCTGAAAT CAGATGGCAC TGTCATCAAT CACGTTGCTA ATATTTTCAT TGCTCAAAAG ATAGAAATAG ACACTCACCA AGCACTGAGA AAAAAACAAA CTTGCGTACA ATCATATACT TTACCTCAAG GACGCGTTGA TGTGTTGATT GAAGTAATTC ATCCATTAGT ACCACTGCTC GTATTTGGTT CTGGATATGA TACGATTCCC GTGGTGCATT TGGCGAAACA TCTGGGTTGG CACGTTACCG TAATTGACGA TCGACCAGGG TATTTGAGGG GCGATCGCTT TCCTCAAGTT GACCAAATTC TCTGGTGCGA ACTCAATGAT TCCCACTCAT ACAAACATTT GCTGACACCG CAAACTGTAG CAGTTGTCAT GACACACCGC TATCTAAGCG ACCTAGCATT TCTCAAGACT CTGATTCCGT CCCAGGTGCG TTACCTGGGA GTGTTAGGCC CAAAACGCCG GATGCAAAAA TTGTGGGATG ATCTGTCTGA AGAAAATATC ATTACCACAT CTGCACAAGA ACAACGAATT TATAACCCTG TAGGACTAGA CATTGCTGCG GAAACACCCC AAGAAATCGC CCTGTCCATC GTGGCAGAAA TTCAAGCTGT AATTGGCGGA GGTAGGGGTA GTTTCTTGCG CGATCGCCCA GGCTCGATCC ACTCTCTCTT AGAGCAACCA TGTCTAACAT TGGCATTATA A
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Protein sequence | MNELQHILQA FVHTQKSAQR SALAMVVQTS GSVYRRPGAR MLLVEDGQMI NAISGGCLEG DVFERAQSLM FGGGEPIVVR YDTTSDEDIV FGFGLGCNGV VDVLIESLGD ETAASQMSFI QDCLQSGQVG AIATVFKIEG ASDITVGSRM MLKSDGTVIN HVANIFIAQK IEIDTHQALR KKQTCVQSYT LPQGRVDVLI EVIHPLVPLL VFGSGYDTIP VVHLAKHLGW HVTVIDDRPG YLRGDRFPQV DQILWCELND SHSYKHLLTP QTVAVVMTHR YLSDLAFLKT LIPSQVRYLG VLGPKRRMQK LWDDLSEENI ITTSAQEQRI YNPVGLDIAA ETPQEIALSI VAEIQAVIGG GRGSFLRDRP GSIHSLLEQP CLTLAL
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